LOCUS       XP_038959457            3273 aa            linear   ROD 22-FEB-2024
DEFINITION  ciliogenesis and planar polarity effector 1 isoform X6 [Rattus
            norvegicus].
ACCESSION   XP_038959457
VERSION     XP_038959457.1
DBLINK      BioProject: PRJNA1074393
DBSOURCE    REFSEQ: accession XM_039103529.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086020) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3273
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     Protein         1..3273
                     /product="ciliogenesis and planar polarity effector 1
                     isoform X6"
                     /calculated_mol_wt=366205
     Region          2953..3266
                     /region_name="Joubert"
                     /note="Joubert syndrome-associated; pfam15392"
                     /db_xref="CDD:464699"
     CDS             1..3273
                     /gene="Cplane1"
                     /gene_synonym="RGD1310081"
                     /coded_by="XM_039103529.2:507..10328"
                     /db_xref="GeneID:310137"
                     /db_xref="RGD:1310081"
ORIGIN      
        1 memrlevlts tsikqkkpwp rvswlgqene avflldekfi neinllsgrt kkkipslqpl
       61 lkdvvflats tndvwlsgvl ttgelflwnr dqdcvkkiqv terpkeaika tvasssrlsl
      121 yvaengkril litssgcill weymelknil sskslslvgq wsqivpeeai llpstkdkea
      181 vvdavfvkne lfgdrclcsf tfysgeclkl tflaiqwyen iftsirslpf rvhwaqqecr
      241 lcnlipkcas vksrgalisa fsrdglalav tlnqkdptat qvlfintlnf vtlcgglkgc
      301 snknpvvpat ltrsywvgdi swthdslfla cvlkrgslvl ltclgelltl vtfgcsiefg
      361 paefiplhpl ityrpqrlpf qdsnnavdsa asesdplrqr fsikahsrlp yllisdgymv
      421 ttlrfldnqs ptmlvralll dstqrlekay qsmmlskpke kglnlrslds lrssllkrhg
      481 kessvqctvp rflqaeetvk lsettdfqdf egeetneveq flnssfsfcd qrkdilfnta
      541 kegrlefasm fdtihakdds ketdrtiael hciqkkllaa wtigvsknva ekklmlnytv
      601 lcithffyil qfikcplpkf dlflnkslkh ntwvlcifql fhqclsthyw dmryrqnvgh
      661 llkltantvk llltqqrkhg lfsekllacl sllrtvtdcl ngtcslqpea apaaadgsrp
      721 aeldslmvpi fqsskenwsw dsslkiypqv tnlvqkpghr lialwrllyk ktlwyqaqls
      781 rripdgdrql tenithevsl vktllchvqa nlqvagdsls qaleltalsg eecfllasye
      841 ksvclwkkal qetqekggrr mrflqlryyl sllychlycy nlndaqglcd hlvreilsys
      901 qlpvqerrdy sdpevavtrn vhpeaavrvv qcmarfmaay ftneplfilp phsvnvlppl
      961 hvktehsvrl iplqhskvas ivrdqnlsnv wtveytlell figglipeav wmahklgdwk
     1021 tsvsigvafq afckrdcnsm wskkkgmdlp lnmipaqifq eklqcflgqp vslaaknekg
     1081 skykqftdpi eeedanllfg svqevlkasa madadivset lqllmdsakd fskklwglvp
     1141 vdlylpappl ycpqpallse ehgdnlllka ekdnrqklsg ilqrvlllfr asrcsfpvaq
     1201 wyilqlrwar kvmqkirvkg slpslssfpe sllnyckggi affrpgaagd hkldevsika
     1261 lgcfrelcal cwmlhirdkl sytcrqyqka rentkiekdl evefdscvve hcfhalewac
     1321 rmlpfsrffn meeliqdiil sligelppir kvaeifvkaf pnpeairvpl rekyhslqqk
     1381 lkhgvvkgpq teelmsvvmr sahkvrvkal krvqrnigaf emniwepdee ekpaaapata
     1441 dtfslgtsls rstltlelgs sllhsdadtf setlsfeekt wihlyqrhap shmdlalvgk
     1501 psdkkkisnq kenpqrkedh etsgkealpv igvweferdd deymnflelf lsyvlerdlc
     1561 srdpgipflt sfsehlrehe lnsllfdvht tlkrrqskas sdsvyragsc favtpesqes
     1621 enlfslnnag arnlesqals alevgsqsgs taenplpevm nherkvglfg lkqkpiyrap
     1681 ddkrekptvq rssghpfwip kffktgrhsf rvlqcsaghp redlplvlqn lfgdagrlve
     1741 wmirwsdrrl lcdsevtrss ckyspvirvk tstaailtsl wlleqpylaa ysatngiikv
     1801 lenhctksqv taeresntdg nadspipvaa qtgaeersdq deccqgiwnr mpaeaenrev
     1861 kstddeilpv thrtekecvd aderhseges ftqdemdvhi ldpeegsvgs prvpdavtrw
     1921 pvsqlsehst eeaqcsrkep letsvdtklt eqkgtsealp ksehsiphsl cidansetss
     1981 aqiselkdkp stvpplmsng aqvtsqtsqk tqgndhrvql pdssdsvrqm lqdemfklvq
     2041 lqqinflslm qivgpsvanl pdtqrlvqqa qsvhfgesqv anptrsdcie vnsgqkllak
     2101 pqsmgectrh pgkssppghe risqpdqdsn getqdiahes tplgrsdgqp kprwrtgasr
     2161 scapaclphv pggegglqll ftaaavqktp qlipparaat agsafpllhf qpkhefkplp
     2221 lpvgripgap frpqaqpkea wglsdscqsp vsqrmvhtmp pspsgssqyy naqamrkaea
     2281 vlpgipkhen ldqctgqesv tpqqdssvfi kpgsvfdvtp rppetalqns fglpllhlqf
     2341 kpsyvfsmps raalgsfpsv pgtegtkhpq lsllhpclpp entvfcipar icillylffs
     2401 stkkiqykkp qliplenlla fkrsqqklah nvfeqgdsah lqflkvnmea pkitqgkkrq
     2461 srraerelqe rraqkprrkp svsfrpddsl isnesevpme pkeqlghhds qpldkfdipf
     2521 emlehdvnts aglhfmasvq kkavgrhdas tntdpaqdke gtsqevdses nktqqvvstn
     2581 sgheplnvpq llipdiylna rlptgisekp lspspphmar htyidvidie addllglpas
     2641 eepsddvakq qshppeapss aelhcmaasv vstapphpsq sqesagstlg lisepakmtq
     2701 scqdgeswrk svmeakepei lsvmpsdrqq ggeqnfqfke qstkldsaeq sllwtllqda
     2761 spacptpspa acpppspvtc vppspaacvp sspaacvpsn pavcptpsps aqklehltak
     2821 lqkmdeqllt vqtiaenieq dfpapevlnl hwekaglvdh vglssrpeie kllaskaisi
     2881 sevsfqtped vedqnnteea seaessvted hssqkaytcp sagsaacssv gwnitspgvn
     2941 nskelfksvs edqlqvtglt diadiiddli tkrgvsshel glteyqarni sriqhpsgrr
     3001 pqrtdeerre ikvwmkrkrk ermaeyldql aekrgrehdp fcsrsspfym tsrqirqrqk
     3061 mkhekdrlql snhysqrisq ayslmnells dsvqitkpad kplgrrrqqc sspkrenaqg
     3121 qnlssnrpag grhisgsrhl rkgeplgrph gssqlrgsnp pyrsqqpmrs hgavgvvplv
     3181 qqaciedere dmvvspwtlp seihkilhdr sgsllqdmsa adeeepehsl aggmdsvses
     3241 tgsilskldw kaiedmvasv eeknlsvhwa ldq
//
