LOCUS       XM_039107280            1068 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus carboxypeptidase A2 (Cpa2), transcript
            variant X1, mRNA.
ACCESSION   XM_039107280
VERSION     XM_039107280.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039107280.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1068
                     /gene="Cpa2"
                     /gene_synonym="CPA2(S)"
                     /note="carboxypeptidase A2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 8 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 49 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:296959"
                     /db_xref="RGD:1305563"
     CDS             154..1017
                     /gene="Cpa2"
                     /gene_synonym="CPA2(S)"
                     /codon_start=1
                     /product="carboxypeptidase A2 isoform X1"
                     /protein_id="XP_038963208.1"
                     /db_xref="GeneID:296959"
                     /db_xref="RGD:1305563"
                     /translation="MDNLVAENPGLVSKVNIGSSFENRPMNVLKFSTGGDKPAIWLDA
                     GIHAREWVTQATALWTANKIASDYGTDPAITSLLNTLDIFLLPVTNPDGYVFSQTTNR
                     MWRKTRSKRSGSGCVGVDPNRNWDANFGGPGASSSPCSDSYHGPKPNSEVEVKSIVDF
                     IKSHGKVKAFITLHSYSQLLMFPYGYKCTKPDDFNELDEVAQKAAQALKRLHGTSYKV
                     GPICSVIYQASGGSIDWAYDLGIKYSFAFELRDTGFYGFLLPAKQILPTAEETWLGLK
                     TIMEHVRDHPY"
ORIGIN      
        1 aatgagcctt aaaaattggg gccgcagtag tcggtaactg gaggatgtcc ccattgttct
       61 aggcctacac tagcgtattt tgtattttgt agcacacgtc ggccacatcc cttttggtgc
      121 cactacggtt tgctggttaa gatttaccaa gaaatggata acctcgtggc tgagaacccc
      181 ggtctagtga gcaaagtgaa tatcggttca tcttttgaaa atcggcccat gaatgtgctc
      241 aagttcagca ccggaggaga caagccagcc atctggcttg atgcggggat ccatgctcga
      301 gagtgggtta cacaagctac tgcactgtgg acagcaaaca agattgcttc tgattatgga
      361 actgatccag ccatcacgtc tcttcttaat actctggata tcttcctgct gcctgtcacc
      421 aatcccgatg gatatgtgtt ctcccaaacc accaatcgaa tgtggagaaa gacccgttct
      481 aaaaggtcag gaagcggctg tgtcggtgtg gatcctaatc ggaactggga tgcaaatttc
      541 ggaggacctg gagccagtag cagcccttgc tctgactcat accacggacc caagcccaac
      601 tctgaagttg aagtgaaatc catagtggac ttcatcaaga gccacgggaa agtcaaagct
      661 tttattaccc ttcacagcta ttcccaactg cttatgttcc cctatggcta taaatgtacc
      721 aagccagatg actttaatga gctggatgaa gtggcccaga aggctgccca ggctttgaaa
      781 agactgcacg gcaccagtta taaagtggga cccatctgtt ctgtcatcta ccaggcgagt
      841 ggtggaagca tcgactgggc ttacgacctt ggcatcaaat actcatttgc ctttgaactg
      901 agggacacag gtttctatgg cttcctcctg ccagccaagc agatcttgcc gacagcagaa
      961 gagacctggc ttggcctgaa gaccatcatg gagcacgtac gagaccaccc ctattaggga
     1021 tcggcagaat agaccgacac cattaaagtc tctgtggtct aaagcaca
//
