LOCUS       NM_183055                551 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus cytochrome c oxidase subunit 8C (Cox8c), mRNA;
            nuclear gene for mitochondrial product.
ACCESSION   NM_183055
VERSION     NM_183055.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Huttemann,M., Schmidt,T.R. and Grossman,L.I.
  TITLE     A third isoform of cytochrome c oxidase subunit VIII is present in
            mammals
  JOURNAL   Gene 312, 95-102 (2003)
   PUBMED   12909344
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Kleeberger,S.R.
  TITLE     Genetic aspects of susceptibility to air pollution
  JOURNAL   Eur Respir J Suppl 40, 52s-56s (2003)
   PUBMED   12762575
  REMARK    Review article
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Nov 27, 2020 this sequence version replaced NM_183055.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY161005.1, SRR26643293.37019.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-226               JAXUCZ010000006.1  127793379-127793604
            227-551             JAXUCZ010000006.1  127794378-127794702
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q32"
     gene            1..551
                     /gene="Cox8c"
                     /gene_synonym="COXVIII-3"
                     /note="cytochrome c oxidase subunit 8C"
                     /db_xref="GeneID:360229"
                     /db_xref="RGD:727840"
     exon            1..226
                     /gene="Cox8c"
                     /gene_synonym="COXVIII-3"
                     /inference="alignment:Splign:2.1.0"
     CDS             101..319
                     /gene="Cox8c"
                     /gene_synonym="COXVIII-3"
                     /note="COX VIII-3; cytochrome c oxidase subunit 8-3;
                     cytochrome c oxidase polypeptide 8; cytochrome c oxidase
                     polypeptide VIII; cytochrome c oxidase subunit VIII;
                     cytochrome c oxidase, subunit VIIIc"
                     /codon_start=1
                     /product="cytochrome c oxidase subunit 8C, mitochondrial"
                     /protein_id="NP_898878.1"
                     /db_xref="GeneID:360229"
                     /db_xref="RGD:727840"
                     /translation="MSRLLQFCSSLLRHRVVLFSKPGHSGRLSHSESPQNQVLTPTES
                     VVGIVVFFATFFIPAAYVMSNLKFFKGE"
     exon            227..551
                     /gene="Cox8c"
                     /gene_synonym="COXVIII-3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaccagctgc tcgccctctc ctcgagcaca ctttaccaac ggccttcgac tctggtggtc
       61 tcccatttgc tcttcctcgg tggccctttt ctgacctgtg atgtctcgct tgctgcagtt
      121 ctgctcttcc ctcctccgac accgtgtagt cctgttctcg aagcctggcc actcaggccg
      181 cctcagccac tcagaaagcc cacaaaacca agtcctgaca cccacggaat cggttgttgg
      241 aattgtcgtg ttttttgcca cctttttcat cccagctgcg tatgtgatga gcaacctgaa
      301 gtttttcaaa ggcgagtaga tacacgatgt cgattaacgg cacctcaaga tccgaaatgc
      361 tttcagaaaa ggccacggct cctttaaatg agaaaaggtg cccgtttgaa cgtcttgtaa
      421 ctatttaatc ttacaactgt atgtctgtgg cgttctgcac cttttttttt tttttttttt
      481 ttttttggac tgtgcatctg atggatgaca aacattattt gcttaggtgt caaataaaat
      541 ggaaacactg g
//
