LOCUS       NM_001399572             563 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus cytochrome c oxidase subunit 7B2 (Cox7b2), mRNA.
ACCESSION   NM_001399572 XM_006250932
VERSION     NM_001399572.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 563)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000014.1.
            
            On Jan 12, 2022 this sequence version replaced XM_006250932.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.2635530.1,
                                           SRR26643293.56850.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-69                JAXUCZ010000014.1  37047081-37047149
            70-118              JAXUCZ010000014.1  37088635-37088683
            119-154             JAXUCZ010000014.1  37090323-37090358
            155-563             JAXUCZ010000014.1  37158880-37159288
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p11"
     gene            1..563
                     /gene="Cox7b2"
                     /note="cytochrome c oxidase subunit 7B2"
                     /db_xref="GeneID:100361960"
                     /db_xref="RGD:2319120"
     exon            1..69
                     /gene="Cox7b2"
                     /inference="alignment:Splign:2.1.0"
     exon            70..118
                     /gene="Cox7b2"
                     /inference="alignment:Splign:2.1.0"
     exon            119..154
                     /gene="Cox7b2"
                     /inference="alignment:Splign:2.1.0"
     exon            155..563
                     /gene="Cox7b2"
                     /inference="alignment:Splign:2.1.0"
     CDS             207..449
                     /gene="Cox7b2"
                     /note="cytochrome c oxidase subunit VIIb2; rCG57154-like;
                     cytochrome c oxidase subunit 7B, mitochondrial"
                     /codon_start=1
                     /product="cytochrome c oxidase subunit 7B2"
                     /protein_id="NP_001386501.1"
                     /db_xref="GeneID:100361960"
                     /db_xref="RGD:2319120"
                     /translation="MMLPLARCALNHLKIQSIPKVVGRQKHSKPSSNFHDKYGNMMLF
                     SGSAFCLGAYIIFMTQMGVEWNLSPVGRVTPKEWNE"
ORIGIN      
        1 ggggatattg acaggtactg gattcacctc ggcgccattt tattttggct tgtgcttgtg
       61 gcgtagctgg cagctgagtc agaacttctg aggagagcat ctgcgctcga gtctacagat
      121 tctcttctca tataactttg aagccatcag ccaaatctct gaaaacagac ctactgcttc
      181 aatcaatagt actcctatca tatgccatga tgcttccatt ggccagatgt gcactaaacc
      241 atctcaagat tcaaagcatt ccgaaagttg tgggaagaca gaaacactca aagccctcat
      301 caaattttca tgacaaatat ggcaatatga tgctgttcag tgggtctgct ttctgtctag
      361 gtgcatatat aatttttatg acccagatgg gggtggagtg gaacctgtct cctgtgggca
      421 gagtcacccc caaagagtgg aatgagtaac tttctcagta cactaacaga attgtctcaa
      481 acctaacttg tcacggacat gttcttctgt tcagtgaaat cagcatagta aaagaaataa
      541 aattgattca gaagtcctaa caa
//
