LOCUS       NM_001106704            1281 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus cytochrome c oxidase subunit 7A2 like (Cox7a2l),
            transcript variant 1, mRNA.
ACCESSION   NM_001106704 XM_001056904 XM_216635
VERSION     NM_001106704.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1281)
  AUTHORS   Lapuente-Brun,E., Moreno-Loshuertos,R., Acin-Perez,R.,
            Latorre-Pellicer,A., Colas,C., Balsa,E., Perales-Clemente,E.,
            Quiros,P.M., Calvo,E., Rodriguez-Hernandez,M.A., Navas,P., Cruz,R.,
            Carracedo,A., Lopez-Otin,C., Perez-Martos,A., Fernandez-Silva,P.,
            Fernandez-Vizarra,E. and Enriquez,J.A.
  TITLE     Supercomplex assembly determines electron flux in the mitochondrial
            electron transport chain
  JOURNAL   Science 340 (6140), 1567-1570 (2013)
   PUBMED   23812712
REFERENCE   2  (bases 1 to 1281)
  AUTHORS   Ikeda,K., Shiba,S., Horie-Inoue,K., Shimokata,K. and Inoue,S.
  TITLE     A stabilizing factor for mitochondrial respiratory supercomplex
            assembly regulates energy metabolism in muscle
  JOURNAL   Nat Commun 4, 2147 (2013)
   PUBMED   23857330
REFERENCE   3  (bases 1 to 1281)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Jan 6, 2022 this sequence version replaced NM_001106704.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22399492.1452694.1, BQ195596.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-341               JAXUCZ010000006.1  16936795-16937135
            342-470             JAXUCZ010000006.1  16948740-16948868
            471-1281            JAXUCZ010000006.1  16949987-16950797
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q12"
     gene            1..1281
                     /gene="Cox7a2l"
                     /note="cytochrome c oxidase subunit 7A2 like"
                     /db_xref="GeneID:298762"
                     /db_xref="RGD:1306111"
     exon            1..341
                     /gene="Cox7a2l"
                     /inference="alignment:Splign:2.1.0"
     CDS             249..611
                     /gene="Cox7a2l"
                     /note="isoform 1 is encoded by transcript variant 1;
                     cytochrome c oxidase subunit VIIa polypeptide 2 like"
                     /codon_start=1
                     /product="cytochrome c oxidase subunit 7A2 like isoform 1"
                     /protein_id="NP_001100174.1"
                     /db_xref="GeneID:298762"
                     /db_xref="RGD:1306111"
                     /translation="MGPAYSRLLESFHAGLEQSPRFLCVYGTLGKGFKPVSREAPPII
                     FATPTKLTSSVTAYDYAGKNKVPELQRFFQKADGVPIHLKRGLPDQMLYRTTMALTVG
                     GTIYCLIALYMASKPKNK"
     exon            342..470
                     /gene="Cox7a2l"
                     /inference="alignment:Splign:2.1.0"
     exon            471..1281
                     /gene="Cox7a2l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctttgggtg ggccaaaggg gaagccgggt ccttttctag ggcggtcgca caggcagcgg
       61 cagtgcgaag ctggcttcag ccaacatgta ctacaagttt agcagtttca cgcagaagtt
      121 ggctagtgct tgggcttcgg aagcctatac tccgcaggta cgggtgtgcc gcgtcgcctt
      181 gagcgagaga acggcggccc gaggcaggca gtcgcgacgt ccgagccggg aggggtttct
      241 gccggcctat gggtccggct tactcgcgtc tcctggaatc ctttcacgca ggcttggagc
      301 agtcgccgag gtttctctgt gtgtacggca ccctaggcaa gggttttaag ccggtttcca
      361 gagaagcacc gcctatcata tttgccacac cgaccaaact gacctccagt gtgacagcat
      421 atgactatgc tgggaagaat aaagttccag agctacagag attcttccag aaggctgacg
      481 gtgtgcccat ccacctgaaa cgaggccttc cggaccaaat gctttaccgg accaccatgg
      541 ctctcacagt gggagggacc atctactgcc tgatcgccct ctacatggcc tcgaagccca
      601 aaaacaaatg aatttgcctg tggaggactg gtttactttg tgacacaaac cctttgaatt
      661 ctcgagtttc attttttccc cccttggata gtctccttaa cattttgcaa acaaaggaaa
      721 agataagaat acactggttt gtttatggcg tgcagatggc ctgtcagatg tcagcttgtt
      781 ttacagttag aactattgtt taaggaaatg acaccaagcc atcgctgagc catcgtgctc
      841 ctggtctccc acgagattct gggtgaaagt tgttcacaaa ctcactcatg gccagcagtg
      901 ctcagggcct ccgggactcg gggggtgtct gagtgtgaag cagagaagcc ttttgggtgt
      961 aggtgtgatt gaggaaggag accaaagcca gggcacaggt gggtgacatg agggcttgag
     1021 ttagccaccc ggggggttgc tccaccttgc agaaaaatgc tagtagaaat tatttgcagt
     1081 ctgcctctaa ttgttgggca gtttgtttca aagggttgtt tgcctctccc agaccttagg
     1141 gaagtgtgtc tttgtttcat catgggaaag aacacctgtc agtgttgcac tttagacagc
     1201 tgtaccagta attctccttt aatcatgctg cggcttgacg ttatgattta cttgactgcg
     1261 gaataaatac atgagcaaag a
//
