LOCUS       NM_001402200             365 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus cytochrome c oxidase subunit 7A1 (Cox7a1), mRNA.
ACCESSION   NM_001402200 XM_003748835
VERSION     NM_001402200.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 365)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Mar 8, 2022 this sequence version replaced XM_003748835.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AW433641.1, FM051929.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-74                JAXUCZ010000001.1  94569216-94569289
            75-161              JAXUCZ010000001.1  94570101-94570187
            162-246             JAXUCZ010000001.1  94570291-94570375
            247-365             JAXUCZ010000001.1  94570771-94570889
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..365
                     /gene="Cox7a1"
                     /note="cytochrome c oxidase subunit 7A1"
                     /db_xref="GeneID:687508"
                     /db_xref="RGD:6496527"
     exon            1..74
                     /gene="Cox7a1"
                     /inference="alignment:Splign:2.1.0"
     CDS             60..302
                     /gene="Cox7a1"
                     /note="cytochrome c oxidase subunit 7A1, mitochondrial;
                     cytochrome c oxidase subunit VIIa polypeptide 1 (muscle);
                     cytochrome c oxidase subunit 7A1, mitochondrial-like"
                     /codon_start=1
                     /product="cytochrome c oxidase subunit 7A1"
                     /protein_id="NP_001389129.1"
                     /db_xref="GeneID:687508"
                     /db_xref="RGD:6496527"
                     /translation="MRALRVSQALIRSFTSSTRSHLENRVAQKQKLFQADNDLPVHLK
                     GGGMDNILYRLTMTLTLGGTAYCLYCLGWASFPHKK"
     exon            75..161
                     /gene="Cox7a1"
                     /inference="alignment:Splign:2.1.0"
     exon            162..246
                     /gene="Cox7a1"
                     /inference="alignment:Splign:2.1.0"
     exon            247..365
                     /gene="Cox7a1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacttgctgc tcgtccttgg gcaaagaggg gaggtgactc gagcagctga ggacgcaaaa
       61 tgagggcctt acgggtctcc caggctctga tccggtcttt tacctcatct accaggagcc
      121 acttagaaaa ccgagtggca cagaagcaga agctcttcca ggcagacaac gacctcccgg
      181 tgcacttgaa gggcggggga atggacaaca tcctgtacag actgaccatg acgctgacgc
      241 tcgggggcac tgcctactgt ttatactgct tgggctgggc ctccttcccc cacaagaagt
      301 gattccaaga agctcagagg acttgggcaa acatcaataa atatgctaac ctcttgagaa
      361 cccaa
//
