LOCUS       NM_001039085             483 bp    mRNA    linear   ROD 20-SEP-2024
DEFINITION  Rattus norvegicus cytochrome c oxidase subunit 6B2 (Cox6b2), mRNA.
ACCESSION   NM_001039085
VERSION     NM_001039085.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 483)
  AUTHORS   Huttemann,M., Jaradat,S. and Grossman,L.I.
  TITLE     Cytochrome c oxidase of mammals contains a testes-specific isoform
            of subunit VIb--the counterpart to testes-specific cytochrome c?
  JOURNAL   Mol Reprod Dev 66 (1), 8-16 (2003)
   PUBMED   12874793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AY152399.1 and CK840972.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY152399.1, CX569537.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-470               AY152399.1         1-470
            471-483             CK840972.1         6-18                c
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..483
                     /gene="Cox6b2"
                     /note="cytochrome c oxidase subunit 6B2"
                     /db_xref="GeneID:654441"
                     /db_xref="RGD:1591896"
     exon            1..66
                     /gene="Cox6b2"
                     /inference="alignment:Splign:2.1.0"
     exon            67..192
                     /gene="Cox6b2"
                     /inference="alignment:Splign:2.1.0"
     CDS             81..347
                     /gene="Cox6b2"
                     /note="COX VIb-2; cytochrome c oxidase subunit VIb
                     polypeptide 2"
                     /codon_start=1
                     /product="cytochrome c oxidase subunit 6B2"
                     /protein_id="NP_001034174.1"
                     /db_xref="GeneID:654441"
                     /db_xref="RGD:1591896"
                     /translation="MLGVQAQMPAPGQWTTPPFDPRFPNQNQTRNCYQNFLDYHRCVK
                     TMDRRGKNTQACDYYFRVFHSLCPVSWVQRWNEQIKQGTFPGKI"
     exon            193..293
                     /gene="Cox6b2"
                     /inference="alignment:Splign:2.1.0"
     exon            294..472
                     /gene="Cox6b2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      451..456
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cox6b2"
     polyA_site      471
                     /gene="Cox6b2"
ORIGIN      
        1 aaagctaaag gcactggtgg actccgcaac tgtggtgttc cagctacgtt ggtccacttc
       61 agtctggaat ttctacctgg atgttgggtg ttcaagccca gatgcctgct ccaggccaat
      121 ggacaacgcc gcccttcgac ccgcgcttcc ctaaccaaaa ccagacgcgt aactgctacc
      181 agaattttct ggactaccac cggtgtgtga agaccatgga tcgccgcgga aagaacacac
      241 aggcctgcga ctactatttc cgtgtattcc attcactgtg tcccgtcagc tgggtgcagc
      301 gctggaatga gcagatcaag cagggaactt tcccaggcaa aatctgacct tgcacttgag
      361 cgctgctcct tggtggcatc aacccccagt gaccgctgtc cttgccccag cctgggttgc
      421 ccccctcctc cactttgtcc ttatgccaca aataaagcta tggtgctgct aaaaaaaaaa
      481 aaa
//
