LOCUS       NM_001191639            3497 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus coronin 7 (Coro7), mRNA.
ACCESSION   NM_001191639 XM_220167
VERSION     NM_001191639.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3497)
  AUTHORS   Bhattacharya,K., Swaminathan,K., Peche,V.S., Clemen,C.S.,
            Knyphausen,P., Lammers,M., Noegel,A.A. and Rastetter,R.H.
  TITLE     Novel Coronin7 interactions with Cdc42 and N-WASP regulate actin
            organization and Golgi morphology
  JOURNAL   Sci Rep 6, 25411 (2016)
   PUBMED   27143109
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3497)
  AUTHORS   Yuan,W.C., Lee,Y.R., Lin,S.Y., Chang,L.Y., Tan,Y.P., Hung,C.C.,
            Kuo,J.C., Liu,C.H., Lin,M.Y., Xu,M., Chen,Z.J. and Chen,R.H.
  TITLE     K33-Linked Polyubiquitination of Coronin 7 by Cul3-KLHL20 Ubiquitin
            E3 Ligase Regulates Protein Trafficking
  JOURNAL   Mol Cell 54 (4), 586-600 (2014)
   PUBMED   24768539
REFERENCE   3  (bases 1 to 3497)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   4  (bases 1 to 3497)
  AUTHORS   Rybakin,V., Stumpf,M., Schulze,A., Majoul,I.V., Noegel,A.A. and
            Hasse,A.
  TITLE     Coronin 7, the mammalian POD-1 homologue, localizes to the Golgi
            apparatus
  JOURNAL   FEBS Lett 573 (1-3), 161-167 (2004)
   PUBMED   15327992
REFERENCE   5  (bases 1 to 3497)
  AUTHORS   Muralikrishna,T., Begum,Z., Swamy,C.V. and Khar,A.
  TITLE     Molecular cloning and characterization of a tumor rejection antigen
            from rat histiocytoma, AK-5
  JOURNAL   DNA Cell Biol 17 (7), 603-612 (1998)
   PUBMED   9703019
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Apr 18, 2023 this sequence version replaced NM_001191639.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.155323.1,
                                           SRR26360194.798218.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-182               JAXUCZ010000010.1  11391617-11391798
            183-279             JAXUCZ010000010.1  11394022-11394118
            280-354             JAXUCZ010000010.1  11395187-11395261
            355-425             JAXUCZ010000010.1  11402439-11402509
            426-609             JAXUCZ010000010.1  11402973-11403156
            610-686             JAXUCZ010000010.1  11404373-11404449
            687-737             JAXUCZ010000010.1  11412713-11412763
            738-824             JAXUCZ010000010.1  11419338-11419424
            825-907             JAXUCZ010000010.1  11419882-11419964
            908-962             JAXUCZ010000010.1  11439147-11439201
            963-1020            JAXUCZ010000010.1  11439541-11439598
            1021-1166           JAXUCZ010000010.1  11439680-11439825
            1167-1259           JAXUCZ010000010.1  11439902-11439994
            1260-1391           JAXUCZ010000010.1  11440154-11440285
            1392-1515           JAXUCZ010000010.1  11440750-11440873
            1516-1691           JAXUCZ010000010.1  11441174-11441349
            1692-1800           JAXUCZ010000010.1  11441829-11441937
            1801-1887           JAXUCZ010000010.1  11442043-11442129
            1888-2030           JAXUCZ010000010.1  11442208-11442350
            2031-2135           JAXUCZ010000010.1  11442424-11442528
            2136-2221           JAXUCZ010000010.1  11442785-11442870
            2222-2363           JAXUCZ010000010.1  11443827-11443968
            2364-2453           JAXUCZ010000010.1  11444059-11444148
            2454-2570           JAXUCZ010000010.1  11445137-11445253
            2571-2706           JAXUCZ010000010.1  11445504-11445639
            2707-2798           JAXUCZ010000010.1  11446038-11446129
            2799-2885           JAXUCZ010000010.1  11446608-11446694
            2886-3497           JAXUCZ010000010.1  11446811-11447422
FEATURES             Location/Qualifiers
     source          1..3497
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..3497
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /note="coronin 7"
                     /db_xref="GeneID:192276"
                     /db_xref="RGD:621591"
     exon            1..182
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     CDS             123..2891
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /note="70 kDa WD repeat tumor rejection antigen; tumor
                     specific antigen 70 kDa; coronin-7-like"
                     /codon_start=1
                     /product="coronin-7"
                     /protein_id="NP_001178568.1"
                     /db_xref="GeneID:192276"
                     /db_xref="RGD:621591"
                     /translation="MNRFKASKFRHMEARPSRREAWISDIRAGTTATCGNHIKSSCSL
                     IAFNSDRPGVLGIISLEGHEENKRHVTYLGCHSDLVTDLDFSPFDDFLLASGSADRTI
                     KLWRLSSTGEALPSVPGVVLGPEELPVDVLQFHPTADGVLVSTAGRTVKVWDVAKQQH
                     LTELEAHKDLVQSAVWSRDGATVGTACKDKQLRIFDPRARAQASQSTQAHENNRDIRL
                     AWTGIQEYLVSTGFNQMREREAKLWDTRVFSSALASITLDTSPGSLIPLLDPDSGLLV
                     LAGKGENQLYCYEVTPQQPALSPVTQCILENALRGAALVPRQALAVMNCEVLQVLQLS
                     DTAIIPISHRVPRKAVEFHEDLFPDTAGSVPASDAHTWWAGDNQQVQKVSLNPAHRPH
                     PRFTSSLLPTLEPSPNMEQPAELPRADTELSEGFSSPSSLVSPSTPSSLGLSLSSTSG
                     IGTSPSQRSLQSLLGPSSKFRHAEGTILHRDSHITNLKGLNLTTPGESDGFCANRLRV
                     AVPLLSSGGQVAVLELQKPGRLPDTALPTLQNGAAVMDLVWDPFDPHRLAVAGEDARI
                     RLWRVPPGGLKNVLTTPETVLTGHTEKIYSLRFHPLAADVLASSSYDLTIRIWDLQAG
                     TEQLRLQGHQDQIFSLAWSPDGKQLATVCKDGRVRVYDPRSSPLPLQDGPGPEGGRGA
                     RIVWVCNGGCLLVSGFDSRSERQLQLYMADALAEGPSALLGLDVAPSTLLPSYDPDTG
                     LVLLTGKGDTRVFLYEVIPEAPFFLECNSFTSPDPHKGFILLPKTECDIQDVEFARCL
                     RLRQTSLEPVAFRLPRVRKEFFQDDVFPDTAVTWASALDAKAWFKGANGQPRLLSLQP
                     PGMTPVSQAPREVPARRTPSSAQYLEEKSDQQKKEELLNAMVAKLGNREDPLPQDSFE
                     GVDEDEWD"
     exon            183..279
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            280..354
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            355..425
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            426..609
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            610..686
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            687..737
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            738..824
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            825..907
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            908..962
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            963..1020
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            1021..1166
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            1167..1259
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            1260..1391
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            1392..1515
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            1516..1691
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            1692..1800
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            1801..1887
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            1888..2030
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            2031..2135
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            2136..2221
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            2222..2363
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            2364..2453
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            2454..2570
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            2571..2706
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            2707..2798
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            2799..2885
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
     exon            2886..3497
                     /gene="Coro7"
                     /gene_synonym="Crn7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgtcatcaa gctgcaagct gctgaggcgg caggctgcaa gagtccaggg cggcttctca
       61 tcatttacct gagacccgac gcccctcgtc ctcaagcctg cgctagctct gtcccagccg
      121 ccatgaaccg cttcaaggcg tccaagtttc ggcatatgga ggcccggccg tcccgccgag
      181 aggcatggat cagtgatatt cgtgcaggga ccaccgccac atgtgggaac cacatcaaat
      241 caagctgcag cctgatcgct ttcaactctg accgcccagg tgtattgggt atcatatctc
      301 tggaaggcca tgaagagaac aagaggcatg tgacctacct tggctgccat tcagacctgg
      361 tcactgactt ggacttctcg ccttttgatg acttcctcct ggcctcaggt tcagctgaca
      421 ggacgataaa gctctggcgt ctgtccagca ctggagaagc tcttccctct gtacctggag
      481 tggtgctggg tcctgaggaa ctgccagtgg acgtactgca gttccacccc actgcagatg
      541 gcgttttggt gagcacagct ggcaggactg tgaaggtctg ggatgtagcc aagcagcagc
      601 acctgacaga gctggaggct cacaaggact tggtgcagag tgctgtttgg agccgggatg
      661 gagccactgt ggggacagca tgtaaggaca agcaacttcg gatctttgac cccagagcaa
      721 gagcccaggc ttctcagagc acgcaggccc atgagaacaa cagagacatc cggctggcat
      781 ggacaggcat tcaagagtac cttgtgtcca ctggattcaa ccagatgcgt gagcgagaag
      841 cgaagctctg ggatacccgt gtcttcagca gtgctctggc ctccatcacc ctggacacct
      901 cacctgggtc tctgataccc ctgctggatc cagactctgg gctgttggtc ctggcaggaa
      961 agggtgagaa tcagctgtac tgctatgagg tgaccccaca gcaacctgca ctgagcccag
     1021 tgacccagtg cattctggag aacgcactac ggggagcagc ccttgtcccc cggcaagcac
     1081 tggctgtcat gaattgtgag gtgctccagg tcctgcagct gagtgacaca gccatcatac
     1141 ccatcagcca ccgcgtgccc cgaaaagctg tggagttcca cgaggacctg tttccagaca
     1201 cagctggctc tgtgcctgct tctgatgccc acacttggtg ggctggggac aaccagcagg
     1261 tccagaaggt cagcctcaac ccagcccacc ggccccaccc tcgcttcact tcctccctgt
     1321 tgcccacttt ggaaccatcc cccaacatgg agcagcctgc agagctgccc agagctgaca
     1381 cagagctgag tgagggcttt tcttccccca gctcactggt ctcaccttcc acgccatcca
     1441 gtctggggct ttcactctcc agcaccagcg gtattggtac cagccccagt cagaggtcac
     1501 ttcagagtct actgggcccc agttctaaat tccgccatgc tgaagggacc atcctccacc
     1561 gagacagcca tatcaccaac cttaaaggac tcaacctcac aacaccgggc gaaagcgatg
     1621 gcttctgcgc taaccgactg cgtgtggcgg ttcccctgct cagcagtggt gggcaggtag
     1681 ctgtgcttga gctgcagaag ccaggccgcc tgcctgacac agcactgcct acgcttcaga
     1741 atggggcggc tgtaatggat ctggtctggg atccctttga tccgcaccgg cttgctgtgg
     1801 ctggggagga cgcccggatc cggctgtggc gggtgccccc tggtggcctc aagaacgttc
     1861 tcaccacacc tgagactgtg cttacaggcc acacagaaaa gatttactct ctgcgcttcc
     1921 accccctggc tgccgatgta ctggcttcca gttcttatga cctaaccatt cgtatctggg
     1981 accttcaggc tggaactgag cagctaaggc tgcaaggcca tcaggaccag attttcagcc
     2041 tggcttggag tccagatgga aagcagctgg ccactgtctg caaggatggg cgtgttcggg
     2101 tctatgatcc ccggagcagc cctttacccc tgcaggacgg tccaggacct gaaggtggcc
     2161 gcggagcccg catcgtctgg gtgtgtaatg gtggttgtct gctggtatct ggttttgaca
     2221 gccgaagtga gcgccagctg cagctgtaca tggctgatgc cctggcagaa ggcccttcag
     2281 cactgctggg cctcgatgta gctccctcta ccctgcttcc cagctatgac cctgacacag
     2341 gcctggtgct tctcactggc aagggagata cccgcgtgtt cctgtacgag gtgatcccag
     2401 aggccccctt cttcttggag tgcaacagct tcacatcacc tgaccctcac aagggcttta
     2461 tccttctgcc caagactgag tgtgacattc aggatgtgga gtttgcccga tgcctgcggc
     2521 tacgccagac ctccttggag cctgttgctt tccggctgcc ccgggtcaga aaagaattct
     2581 tccaagatga tgtgttccca gatacagctg tgacctgggc gtccgcactc gacgccaaag
     2641 cctggttcaa gggtgctaat ggacaacccc ggctactgag tttacagccc cctggcatga
     2701 ccccagtgag ccaagccccc cgggaggtcc ctgcccgaag aaccccatcc tcagcacagt
     2761 acttggaaga gaagtctgac cagcaaaaga aagaagagct gctgaatgcc atggtggcaa
     2821 agctggggaa ccgagaagac ccactgcccc aggactcctt tgaaggggtg gatgaagatg
     2881 agtgggacta gcctgcatgt gaggcacgcc tacccacagc tgccactgcc acctccctga
     2941 accgcctgcg gcccctccac accttatatc tctgcaaact gaacagtgct gcgctggccc
     3001 tggcacacac atccagccca gaagccctgg gcttcatgca ggcctcaggc acttccacag
     3061 ctgctgggcc tcgccgcagc tccagagact gtctgctcct ttgctgtctg gggccagctg
     3121 tttattctca gcggcctgtc agcatgagac accactgggt gggaggtagg tgtcagtagc
     3181 atgtctctgg gccaaccctg gatgccctgg ctctcctagt ctttctctgg ttttctctaa
     3241 catcatctgc cgtcactaca agccaagcta tcttgcctac cgcaccagcc ccagtcaagg
     3301 acactgggag ctggtccccc acaggctgtt ggggacagct ctctcctcgg gcctaggacc
     3361 atttgccctg cttcttgggg cttgagacca ggagaaaggg tctcgtggag ctaacagcct
     3421 cattacagtg gtgtggaccc cacaacaaac agcctataca ctctggatgt gtccagcaat
     3481 taaacttttc taagcta
//
