LOCUS       XM_217183               3709 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus coronin 2B (Coro2b), transcript
            variant X1, mRNA.
ACCESSION   XM_217183
VERSION     XM_217183.10
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 9, 2024 this sequence was replaced by
            NM_001427032.1.
            
            On Jan 21, 2021 this sequence version replaced XM_217183.9.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3709
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3709
                     /gene="Coro2b"
                     /note="coronin 2B; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 37 ESTs, 6 long
                     SRA reads, 16 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 135
                     samples with support for all annotated introns"
                     /db_xref="GeneID:300768"
                     /db_xref="RGD:1561953"
     CDS             387..1829
                     /gene="Coro2b"
                     /codon_start=1
                     /product="coronin-2B"
                     /protein_id="XP_217183.6"
                     /db_xref="GeneID:300768"
                     /db_xref="RGD:1561953"
                     /translation="MTVTKMSWRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNH
                     FCAVNARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNI
                     IASCSEDTSVRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDY
                     KVLIWNLDIGEPVKMIDCHTDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEA
                     NCKNHRVNRVVFLGNMKRLLTTGVSRWNTRQIALWDQEDLSMPMIEEEIDGLSGLLFP
                     FYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSA
                     CEVFRFYKLVTLKGLIEPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGVNRDP
                     VLMSLKEGYKKSSKVVFKAPIREKKSVVVNGIDLLENVPPRTENELLRMFFRQQDEIR
                     RLKEELAQKDIRLRQLQLELKNLRNNPKNC"
ORIGIN      
        1 tccagcttgt gacttcagcc ggcgcccaga gccaacgcgg caaggaaggc cgggtccccg
       61 cccacggccc cggccgcagg tgccaggagc ccgagggggg ccgcgcctgg acgcgcgagg
      121 ctggggaccg tcaggcgccg ggactgcgct cccgcctctg cctccgcctc ctctttgtag
      181 cgagtccccg gtcggtcctc cccgcccccc gcgcggcccg ccgcccgcct ttcttcctgc
      241 ctcgccttcc tgcggcgcgg cggcctcatc tattatagat gctcggccgc ggctgacatc
      301 agccagcggc ctccagagcg cgcggtcccc agcccggccc agccgcccgc cgccgcccgc
      361 gcccagcccc gccgcccgct ttctgcatga ctgtcacaaa gatgtcctgg cgaccgcagt
      421 accgaagttc caagtttcgg aacgtgtacg ggaaagtggc caacagggag cactgctttg
      481 acgggatccc catcaccaag aacgtccacg acaaccactt ctgtgcagtc aatgcccgct
      541 tcctggccat agtcactgag agtgcaggag gtggttcctt cctcgtcatc cccctggagc
      601 agacaggcag aatcgagcca aactacccca aggtgtgtgg tcatcaaggc aatgtgctgg
      661 acatcaaatg gaaccccttc attgacaaca tcatcgcctc ctgctctgag gacacttcgg
      721 tgcggatctg ggagatccct gagggcgggc tgaagcggaa catgaccgag gctctcctgg
      781 agctccacgg acacagccgc cgtgtggggc tggttgagtg gcaccccaca actaacaaca
      841 ttctgttcag tgctggctat gactacaagg tcctcatctg gaacctggac ataggagagc
      901 cagtgaaaat gattgactgt cacacagatg tgatcctctg catgtccttc aacacagacg
      961 gcagcctgct caccaccacg tgcaaagaca agaagcttcg cgtgattgag ccccgctctg
     1021 gccgtgttct gcaggaggca aactgcaaaa accacagagt gaaccgggta gtgttcctgg
     1081 gcaacatgaa gcggctcctc acgacagggg tctccaggtg gaacaccaga cagattgccc
     1141 tctgggacca ggaggatctg tccatgccaa tgatcgagga agaaattgat ggactctcag
     1201 gcctcctgtt cccattctat gatgctgaca cccacatgct ctacctggct ggaaaggggg
     1261 atggaaacat ccggtactat gagatcagca cggagaagcc ctacctgagc tacctcatgg
     1321 agttccgctc cccagcccca cagaaaggcc taggtgtcat gcccaagcat gggttggatg
     1381 tgtctgcttg cgaggtcttc cgcttctaca agctcgtgac tctcaagggc ctaattgaac
     1441 ccatctccat gattgtgccc cggaggtcag attcctacca ggaggacatt taccccatga
     1501 cgccaggcac agagccagcg ctgacccctg atgaatggct gggaggcgtc aaccgagatc
     1561 ccgtgctgat gtctctgaag gaaggctata agaagtcttc aaaagtggta tttaaggccc
     1621 ccatcagaga aaagaagagc gtcgtcgtca acggcataga tttattagaa aatgtccctc
     1681 ccaggacaga gaatgagctc ctcaggatgt tcttcaggca gcaggatgag attcggaggc
     1741 tgaaggagga gttggcacag aaggacatcc ggctccgtca gctccagctc gaactgaaaa
     1801 atctgcgcaa caaccccaag aactgctagc cccgcctcgg gctgtgctag cccctcctcg
     1861 ggctgtgcta gcccctcctc gggctgtgct agccccgcct cgggctgtgc tagctcctcc
     1921 tcgggctgtt ttccaagccg atctctccgt tgattctact ggtccctaaa ctgcctctta
     1981 tctgtagagc ccagagacag ggcctggact gaagctgggg accagttggt agaccctacc
     2041 taccacatca agaactggaa gctgaccttt gacctcctga ctttatgcta acaccagttc
     2101 cccagcttct cctggaaagc ccacccctga ctggctgccc ttttccttgc agccccaaga
     2161 gccaggcttc cccttggctc cctgcaggtg tcctcggagg gacaggaaga gtgggattac
     2221 atcgatttag aaattgaatt tgtcccctgc agaggggctg ccaggaccta tctacacagg
     2281 aaccagtcgc tcagatccca gcattacttt ctgaagcaca gtgagggctg gattgagggt
     2341 agagtgctct gcccacctcc tgcctcattc tgctcccagc tgcccagcaa gctcagctca
     2401 tctccaccaa tggtgagcac ctggcagctg gcccttctct ttctgaactc tctcctaccc
     2461 cccttgtctt cagggaatga agaggccgct ctccaaggcc ataatgaccc tttgcctacc
     2521 ctgtggttct cttcaaagct cttttacacc ccctttccat ttaatttgtg aagcaggcag
     2581 ggtaggaagt agtgtcccca cttgtcaaat gacagaactg agggctgcca tcaggaagca
     2641 aatttatagt cacccagagg gtcagcagtg gaccaagtac ccttggtatc cagaccccac
     2701 ggccaggccc ttcccactgt attgagatgc caatcccttt gtgggcttcc gccgaatgag
     2761 acctggaagc cacttccact gtctgcccaa caccagtagt gccaacatgc catactgcca
     2821 ggttgaggcc cttacactca gtgcccctgg accccctggc ctgcactctt tgctctcact
     2881 ccgtaggggg tggggggtga ggggagggcc tccatctgac atgaggcctc ttcctggaag
     2941 ctgaggcaga gaaagggtag agtttggccc tagggcaggc ggaacaagat ggcttccagg
     3001 gatgctctgc ctgtctccct ccactcccct cccttctcac ttccaaccct gctatctcag
     3061 ccactttcag ccttacacac gcaggatgac cacagccact ccacccacac agcactttaa
     3121 agtttcccca gttgtttgac acatagctct caccgactcg tgcatctgcc ctactttaca
     3181 gtgaaggaaa ctgggaagtg accctctctg cacgaagctc tgggatgctg catctccttc
     3241 ggtcttttac acacacgctt gctttatcct ctctccccct cccctttttc catctcccca
     3301 cctaacacat ggagctcaaa aggactggtg tcaggacagt cacggccatt cgggcagagg
     3361 aggtgtggga atctctgtct ttggctggga tctgctatac ataggacact tcttgcctgc
     3421 ccttcccatg gccaccctgc aaaaacttcc caactgcaga ggccctcctg gggaacgggg
     3481 aggtgaggtt ccccagccct ggggtctctc ctctccaacc acggatgctc cctgttgcca
     3541 gcgtgctgaa gcacgttctc ctcctgcacc accgtggcta aactgtcggc tctcatctcc
     3601 ccctcctgga gctttctttc tctcattgac ctttgtggtc ttctgtgatt atttatgctg
     3661 cctcccaagg atagaattga aataaaatgt tttgaagtta tcaagccaa
//
