LOCUS       NM_001011983            1762 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus coenzyme Q6 monooxygenase (Coq6), mRNA; nuclear
            gene for mitochondrial product.
ACCESSION   NM_001011983 XM_216748
VERSION     NM_001011983.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1762)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079342.1.
            
            On Feb 11, 2005 this sequence version replaced XM_216748.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079342.1, SRR8487231.144294.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q31"
     gene            1..1762
                     /gene="Coq6"
                     /note="coenzyme Q6 monooxygenase"
                     /db_xref="GeneID:299195"
                     /db_xref="RGD:1311149"
     exon            1..212
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..1456
                     /gene="Coq6"
                     /note="coenzyme Q6 homolog, monooxygenase; coenzyme Q10
                     monooxygenase 6; ubiquinone biosynthesis monooxygenase
                     COQ6, mitochondrial"
                     /codon_start=1
                     /product="ubiquinone biosynthesis monooxygenase COQ6,
                     mitochondrial precursor"
                     /protein_id="NP_001011983.1"
                     /db_xref="GeneID:299195"
                     /db_xref="RGD:1311149"
                     /translation="MAARIGPMAGLLCVRWWSTAQLAARGGPLVACRRWTSSSTDSVY
                     DVVVSGGGMVGSAMACALGHDIHFHDKKILLLEAGPKKTLEKLSETYSNRVSSISLGS
                     TTLLSSFGAWDHICNMRCKAFRRMQVWDSCSEALIMFDKDNLDDMGYIVENDVIMHAI
                     TKQLEAVADRVKVLYESKAVGYAWPGPFSLADSSPWVHITLGDGSTLQTKLLIGADGH
                     NSGVRQAAGIQNVGWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPLSDTLSS
                     LVWSTSHAHAAELVSMHEEEFVDAINSAFWSDVHHTDFVDSASAMVHHAVALLKPTKV
                     SARQLPPSVAKVDAKSRALFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMGFG
                     DISSLIHYLSTAAFNGKDLGSMSHLTGYETDRQRHNTALLAATDLLKRLYSTSTTPLV
                     LLRTWGLQATNAVSPLKEQIMAFASR"
     exon            213..347
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
     exon            348..406
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
     exon            407..530
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
     exon            531..661
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
     exon            662..769
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
     exon            770..832
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
     exon            833..940
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
     exon            941..1143
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
     exon            1144..1259
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
     exon            1260..1426
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
     exon            1427..1738
                     /gene="Coq6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcgcggacg taggctggag tctttatggc ggcccgcatt ggccccatgg caggtttgct
       61 ctgtgttcgc tggtggagta ccgcgcaact tgcagccaga ggaggcccac tagttgcctg
      121 tcggcgatgg acgagctcct cgacagactc cgtgtacgat gtggtggtgt caggaggagg
      181 catggtgggc tctgccatgg cttgtgcctt gggacatgat attcactttc atgacaagaa
      241 aatcctattg ctggaagcgg gtccgaagaa aaccctggag aaactgtcag aaacttacag
      301 caacagagtc agctccatat cccttggctc cacaaccctt ctcagcagtt ttggtgcatg
      361 ggaccacatc tgcaatatgc gttgcaaagc cttccggcgg atgcaggttt gggactcctg
      421 ctcagaggcc ttgataatgt tcgacaagga taacttggat gacatgggct atatagtgga
      481 aaatgacgtc atcatgcacg ccatcaccaa gcagctggag gcggtggcag atcgagtgaa
      541 ggttctctac gagagcaaag ctgttggcta tgcctggcct ggtccatttt ccttggcaga
      601 ctccagccct tgggtccata ttaccctagg tgatggcagc accctccaga ccaagctgtt
      661 gattggtgct gatggccaca actcaggagt gaggcaagct gctgggatcc agaatgttgg
      721 ctggaactac gaccagtctg ctgtggtggc cactctccac ttatcagagg ccacagaaaa
      781 caatgtagcc tggcagagat ttcttccctc tgggcctatt gctctgctcc cgctctcaga
      841 taccctgagt tccttggtgt ggtccacgtc acatgcccat gcagccgagc tggtcagcat
      901 gcatgaggaa gagttcgtgg atgccatcaa ctcggccttt tggagtgatg ttcaccacac
      961 agacttcgtc gactcagcta gtgccatggt gcaccatgct gtcgcccttc tgaagcccac
     1021 taaggtctcc gcccgccagc tgcccccaag cgtagccaag gtggatgcca agagcagagc
     1081 cctctttcct ctggggctgg gacatgctgc tgagtacgtc cggcctcggg tggccctcat
     1141 cggtgatgca gcccacagag tccatccact tgcaggacaa ggtgtcaaca tgggcttcgg
     1201 ggatatttcc agcttgattc attatctcag tacagcagcc ttcaatggca aggacttagg
     1261 ctccatgagc cacctcacag gctatgaaac agaccgacag cgtcataata ctgctcttct
     1321 ggctgctact gacctgctga aaaggctcta ctctaccagt accactccgc tagtgttgct
     1381 caggacctgg ggcctgcagg ccactaatgc agtgtctcct ctcaaagaac agattatggc
     1441 ctttgcgagt agatgagggc ccctcttctg gggaccatgg tgatgacaaa gaacacctag
     1501 ccctgggaca tcacaggcct tcccagtatg gactaataaa cttacactgg aacttgtgtc
     1561 tcttcctctt ctgattaatg catctgtgga gccaaaacag tgacagctaa ggaagaaccc
     1621 aaaggaaaac tatttaatca aaggttttta ttactacaca gaggagtcac cgagatgctg
     1681 tccctcattt cactcggtaa caatccattc taaataaagt actttaatgc tggtcataaa
     1741 aaaaaaaaaa aaaaaaaaaa aa
//
