LOCUS       NM_001108294             914 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus COPI coat complex subunit zeta 2 (Copz2), mRNA.
ACCESSION   NM_001108294 XM_001081315 XM_340887
VERSION     NM_001108294.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 914)
  AUTHORS   Wegmann D, Hess P, Baier C, Wieland FT and Reinhard C.
  TITLE     Novel isotypic gamma/zeta subunits reveal three coatomer complexes
            in mammals
  JOURNAL   Mol Cell Biol 24 (3), 1070-1080 (2004)
   PUBMED   14729954
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_340887.3, XM_001081315.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ225734.1, SRR8487227.165514.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..914
                     /gene="Copz2"
                     /note="COPI coat complex subunit zeta 2"
                     /db_xref="GeneID:360611"
                     /db_xref="RGD:1306948"
     exon            1..112
                     /gene="Copz2"
                     /inference="alignment:Splign:2.1.0"
     CDS             11..634
                     /gene="Copz2"
                     /note="coatomer protein complex, subunit zeta 2"
                     /codon_start=1
                     /product="coatomer subunit zeta-2"
                     /protein_id="NP_001101764.1"
                     /db_xref="GeneID:360611"
                     /db_xref="RGD:1306948"
                     /translation="MQRPEAWPRPHPGEGASAAQAGGAAPPTRATEQRFQEPSLYTIK
                     AVFILDNDGRRLLAKYYDDTFPSMKEQMVFEKNVFNKTSRTESEIAFLAGMTIVYKSS
                     IDIFLYVVGSSSENELMLMSVLACLFDSLSHILRKNVEKRWLLENMDGAFLVLDEIVD
                     GGVILESDPQQVIQKVNFRTDDSGLTEQSVAQVLQSAKEQIKWSLLK"
     exon            113..187
                     /gene="Copz2"
                     /inference="alignment:Splign:2.1.0"
     exon            188..269
                     /gene="Copz2"
                     /inference="alignment:Splign:2.1.0"
     exon            270..361
                     /gene="Copz2"
                     /inference="alignment:Splign:2.1.0"
     exon            362..417
                     /gene="Copz2"
                     /inference="alignment:Splign:2.1.0"
     exon            418..495
                     /gene="Copz2"
                     /inference="alignment:Splign:2.1.0"
     exon            496..547
                     /gene="Copz2"
                     /inference="alignment:Splign:2.1.0"
     exon            548..586
                     /gene="Copz2"
                     /inference="alignment:Splign:2.1.0"
     exon            587..914
                     /gene="Copz2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcgagcgga atgcagcggc cggaggcctg gccacgtccg cacccggggg agggggcctc
       61 ggccgctcaa gccgggggcg cagcgccgcc cacccgagcc acggagcaga ggtttcagga
      121 accttctctc tacaccatca aggctgtctt catcctagat aatgatggac gaaggctgct
      181 ggccaagtat tatgacgaca catttccctc catgaaggag cagatggttt tcgagaaaaa
      241 tgttttcaac aagaccagtc gcaccgaaag tgaaatcgca tttttggcgg gcatgactat
      301 tgtctacaag agcagtattg acatcttcct atatgtggtg ggatcgtcct ctgagaatga
      361 gctgatgctc atgtctgtgc tggcctgcct gtttgactct ctgagccaca tcttaaggaa
      421 gaacgtggag aaacgctggt tgctggagaa catggacgga gccttcttgg tgctggatga
      481 aattgttgat ggaggtgtga tcctggagag tgacccccag caagtgatcc agaaagtgaa
      541 ttttaggact gatgacagtg gcctaacaga acagagcgtg gcccaggttc ttcagtcagc
      601 caaggaacaa attaagtggt cgttattgaa atgaagacct tggagtcaag gctcctttcc
      661 cagagaacct ttgccggtcc ctgcgtaagc cccaaaatgt caagaggcaa gagagaccac
      721 cctgccttct ccggcctctc tccctgaggc ctcgtgccag ggattctgag acccaaaagc
      781 ttggccccag ttctgtcatc cttgctcagc gtcccggcct gcccctgggg tcatgggaac
      841 cagcaaaatt gcctcccctt ggacctctga catctcagtc ctaggactta ataaacttcc
      901 aatttttccc caaa
//
