LOCUS       NM_001108117            1732 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus COPI coat complex subunit zeta 1 (Copz1), mRNA.
ACCESSION   NM_001108117 XM_001069027 XM_235705
VERSION     NM_001108117.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Slater LH, Hett EC, Clatworthy AE, Mark KG and Hung DT.
  TITLE     CCT chaperonin complex is required for efficient delivery of
            anthrax toxin into the cytosol of host cells
  JOURNAL   Proc Natl Acad Sci U S A 110 (24), 9932-9937 (2013)
   PUBMED   23716698
REFERENCE   2  (bases 1 to 1732)
  AUTHORS   Moelleken J, Malsam J, Betts MJ, Movafeghi A, Reckmann I, Meissner
            I, Hellwig A, Russell RB, Sollner T, Brugger B and Wieland FT.
  TITLE     Differential localization of coatomer complex isoforms within the
            Golgi apparatus
  JOURNAL   Proc Natl Acad Sci U S A 104 (11), 4425-4430 (2007)
   PUBMED   17360540
  REMARK    GeneRIF: analysis of differential localization of coatomer complex
            isoforms within the Golgi apparatus
REFERENCE   3  (bases 1 to 1732)
  AUTHORS   Wegmann D, Hess P, Baier C, Wieland FT and Reinhard C.
  TITLE     Novel isotypic gamma/zeta subunits reveal three coatomer complexes
            in mammals
  JOURNAL   Mol Cell Biol 24 (3), 1070-1080 (2004)
   PUBMED   14729954
REFERENCE   4  (bases 1 to 1732)
  AUTHORS   Futatsumori M, Kasai K, Takatsu H, Shin HW and Nakayama K.
  TITLE     Identification and characterization of novel isoforms of COP I
            subunits
  JOURNAL   J Biochem 128 (5), 793-801 (2000)
   PUBMED   11056392
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474035.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_235705.4, XM_001069027.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB607812.1, BC168757.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q36"
     gene            1..1732
                     /gene="Copz1"
                     /note="COPI coat complex subunit zeta 1"
                     /db_xref="GeneID:315345"
                     /db_xref="RGD:1306154"
     exon            1..67
                     /gene="Copz1"
                     /inference="alignment:Splign:2.1.0"
     CDS             50..583
                     /gene="Copz1"
                     /note="coatomer protein complex, subunit zeta 1"
                     /codon_start=1
                     /product="coatomer subunit zeta-1"
                     /protein_id="NP_001101587.1"
                     /db_xref="GeneID:315345"
                     /db_xref="RGD:1306154"
                     /translation="MEALILEPSLYTVKAILILDNDGDRLFAKYYDDTYPSVKEQKAF
                     EKNIFNKTHRTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLS
                     QMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTV
                     SQVLQSAKEQIKWSLLR"
     exon            68..136
                     /gene="Copz1"
                     /inference="alignment:Splign:2.1.0"
     exon            137..218
                     /gene="Copz1"
                     /inference="alignment:Splign:2.1.0"
     exon            219..310
                     /gene="Copz1"
                     /inference="alignment:Splign:2.1.0"
     exon            311..366
                     /gene="Copz1"
                     /inference="alignment:Splign:2.1.0"
     exon            367..444
                     /gene="Copz1"
                     /inference="alignment:Splign:2.1.0"
     exon            445..496
                     /gene="Copz1"
                     /inference="alignment:Splign:2.1.0"
     exon            497..535
                     /gene="Copz1"
                     /inference="alignment:Splign:2.1.0"
     exon            536..1732
                     /gene="Copz1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggcgacgt cgcttgtgcg actccacgtc ggcagcagct acgggcaaga tggaggcgct
       61 gattttggag ccctccctgt acactgtcaa ggccatcctg attctggaca atgacggaga
      121 ccgactcttc gccaagtact atgacgacac ctaccccagt gtcaaggagc aaaaagcctt
      181 tgagaagaac attttcaaca agacccatcg gacggatagt gaaatcgccc tgttggaagg
      241 gctgacagtg gtctataaaa gcagcattga tctctatttc tatgtgatcg gcagctccta
      301 tgaaaacgag ctgatgctca tggctgttct gaactgcctc ttcgactccc tgagccagat
      361 gctgagaaaa aacgtagaaa agcgagcttt gctggagaac atggaggggc tcttcttggc
      421 tgtggatgaa attgtagatg gaggggtgat cctagagagc gacccccagc aagtggtgca
      481 ccgggtagct ttgaggggtg aagacgtccc ccttacagag cagaccgtgt ctcaggtgct
      541 gcagtcagcc aaagagcaga tcaaatggtc cctccttcgg tgaaggtgtt ctgagcccag
      601 ttccttgccc ctcaaagccc acatctgctg tgacttctta tccaggcccc ccaacttacg
      661 tccttagggt catcttggag aattgcaatg gattcttgtg tctcatactt tctggggttc
      721 tttcccctcc ctctcatgag agtaaagtcc ccagcatatt tgagtgagtc agagaaaaca
      781 ccctcgtcct acttacactg gtctcgtccc ccctatcccc ccctcaaatc ccccattctc
      841 tccttggttt cttggccctt tactgtggct gtactttaga tcaacaaagt aagagaaaga
      901 atgtgctgag tgttttcttc cctgtgcctt aagggccctc atcccagcag cccatatatc
      961 cagcaaaggg aggactacta tcttcagcac aagtgggttt ggagtggcag aggccatatg
     1021 ttctttgccg cagcttctct ccttcctgct gccctatcct ctgccttaga agaaatggga
     1081 acaccttata gggagtggac agagctgcag aggaaccgtg atttaaaggc tcttggagtt
     1141 atgaagtgca tcctctaccc tgatctggcc ttcagcctcc aagctgctat acctgcacgt
     1201 ggtcctgaga acatctctct aggtctgtac cacacctctc tgcctgtatc acctgtgaga
     1261 tctttgcctg gtgtggcctc tgtcaccctg gagcaaaacc agaccttgga actaaaacta
     1321 ctttagtccc tagaaaagtt tatgctcaga actgaggaag gaaagggcct aatggtgttt
     1381 gccttgctgt gttccttcta ctcagcgtca cactcacatt cctctgcctt ggttctacaa
     1441 tctgctgttg agttccccct ctctgcatca gtcttcccta gaagcagggg gtctggtgca
     1501 gtgcctttcc tctgaggctt ggattcctgt tcttgggtgt aatgttgccc cttgacccca
     1561 catccctgtg aaaatgactt ggaaaaaaaa aaaaaacgtt tctgagcaag cattctgctt
     1621 catgcattgg ctgaagtggg cagactgaag gcggcctctg caagaaatgg agtcaggcga
     1681 agtccacctt gtacactgct gtgcagcaga ggaataaaga atctcttcca aa
//
