LOCUS       NM_001108807            2497 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus COP9 signalosome subunit 7B (Cops7b), mRNA.
ACCESSION   NM_001108807 XM_001064503 XM_343614
VERSION     NM_001108807.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Sharon,M., Mao,H., Boeri Erba,E., Stephens,E., Zheng,N. and
            Robinson,C.V.
  TITLE     Symmetrical modularity of the COP9 signalosome complex suggests its
            multifunctionality
  JOURNAL   Structure 17 (1), 31-40 (2009)
   PUBMED   19141280
REFERENCE   2  (bases 1 to 2497)
  AUTHORS   Fang,L., Wang,X., Yamoah,K., Chen,P.L., Pan,Z.Q. and Huang,L.
  TITLE     Characterization of the human COP9 signalosome complex using
            affinity purification and mass spectrometry
  JOURNAL   J Proteome Res 7 (11), 4914-4925 (2008)
   PUBMED   18850735
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001108807.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: SRR26643284.12594.1, SRR26643298.49982.1
                                    [ECO:0000331]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-162               JAXUCZ010000009.1  94686314-94686475
            163-380             JAXUCZ010000009.1  94691338-94691555
            381-558             JAXUCZ010000009.1  94693686-94693863
            559-634             JAXUCZ010000009.1  94697608-94697683
            635-723             JAXUCZ010000009.1  94702271-94702359
            724-926             JAXUCZ010000009.1  94705054-94705256
            927-1032            JAXUCZ010000009.1  94706847-94706952
            1033-2497           JAXUCZ010000009.1  94710439-94711903
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q35"
     gene            1..2497
                     /gene="Cops7b"
                     /note="COP9 signalosome subunit 7B"
                     /db_xref="GeneID:363273"
                     /db_xref="RGD:1306918"
     exon            1..162
                     /gene="Cops7b"
                     /inference="alignment:Splign:2.1.0"
     exon            163..380
                     /gene="Cops7b"
                     /inference="alignment:Splign:2.1.0"
     CDS             223..1191
                     /gene="Cops7b"
                     /note="COP9 (constitutive photomorphogenic) homolog,
                     subunit 7b; COP9 constitutive photomorphogenic homolog
                     subunit 7B"
                     /codon_start=1
                     /product="COP9 signalosome complex subunit 7b"
                     /protein_id="NP_001102277.1"
                     /db_xref="GeneID:363273"
                     /db_xref="RGD:1306918"
                     /translation="MQQWEASGGTAPVTGRRRQKSAGRRSDHGSLTTCRQALGGRDIG
                     EENRVGGDRSQDQRMAGEQKPSSNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFG
                     ELLELANVQELAEGANAAYLQLLNLFAYGTYPDYIANKESLPELSAAQQNKLKHLTIV
                     SLASRMKCIPYSVLLKDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGR
                     DIQKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHHRTQQQVEAEVSNIKK
                     TLKATASSSAQEMEQQLAERECPPHTEQRQPTKKMSKVKGLVSSRH"
     exon            381..558
                     /gene="Cops7b"
                     /inference="alignment:Splign:2.1.0"
     exon            559..634
                     /gene="Cops7b"
                     /inference="alignment:Splign:2.1.0"
     exon            635..723
                     /gene="Cops7b"
                     /inference="alignment:Splign:2.1.0"
     exon            724..926
                     /gene="Cops7b"
                     /inference="alignment:Splign:2.1.0"
     exon            927..1032
                     /gene="Cops7b"
                     /inference="alignment:Splign:2.1.0"
     exon            1033..2497
                     /gene="Cops7b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtgccgagc agtgtgcgca tatgtggact ccttctatgg ggttggtttc tgaatcctgt
       61 tacttgaaac ccagcaggaa gatccacttt taccccggag acatgacagc ccaccgacag
      121 ttaacttctg tttacatgga actcaggagt ctgcaaatca tgcctcaatt taagtgggac
      181 gtggcgaaag cagaggggga acattttgta ggcggaactt gaatgcagca gtgggaggct
      241 tccgggggaa cagcaccagt gacgggtcgg cggagacaga aaagtgccgg acgccggtcc
      301 gatcatggaa gcttgacaac ctgcaggcag gctctgggag gccgagacat cggcgaagag
      361 aacagagtcg gcggggacag atctcaagac cagagaatgg caggtgaaca gaaaccctca
      421 agtaacctct tggagcagtt tattttatta gccaaaggca ccagcggctc agccctcacc
      481 actctcataa gccaggtact ggaggctcct ggagtttatg tttttggaga actactggag
      541 ttggccaatg ttcaggagct tgcagaagga gctaatgctg catatttgca gttgctgaac
      601 ctgtttgcct atggtacata cccggattac atagccaaca aggagagcct gccagaactg
      661 agcgcagccc agcagaacaa gctgaagcat cttaccatcg tgagtttggc atcaagaatg
      721 aagtgtatcc cctactctgt gctgctgaag gacctggaga tgaggaatct ccgggaacta
      781 gaagacctta tcattgaggc tgtctacact gacatcatcc agggcaagct ggaccagcga
      841 aaccagctcc tggaagtgga tttctgcatt ggccgtgaca tccagaagaa agatatcaat
      901 aatattgtca agaccttgca tgaatggtgt gacggctgtg aggcagttct cctgggcatt
      961 gagcagcaag ttctgagagc caaccagtac aaagagaacc accaccggac tcagcagcag
     1021 gtggaagccg aggttagcaa cattaagaag acactcaaag caacagcgtc ctcctcagct
     1081 caggaaatgg agcagcaact ggctgaacgg gagtgtcccc cccatactga gcagaggcaa
     1141 cccactaaga agatgtccaa agtgaaaggt ctggtctcca gccgccacta gggccggctg
     1201 gggcagctgg cactcagcag gcctgggtca ggtgggaggg gacacccagg gcctatttcc
     1261 tcccctctct aactgcagtg agttccagat ctgcccgccc ctcaccagta cctccccatc
     1321 cattggtacc atttcggaaa atgattgctc ctcccttgcc tcctttccta gttgttccct
     1381 tcagactcag gggctcaacg gatgccatcc taacagggtc caacactgcc tggcttccct
     1441 gcagggtcct tgtctctgtg atgggctacc tccctcccag ttgttctttt gcccctgtca
     1501 ttttgtcagg ctggtcctaa gctggaggca gtttccccag ccctgaggga tgactgtgga
     1561 ggtggctcct ctctgagtga agagggggcc ttgcttctcc agcctcgtgt accacagtac
     1621 ccacaatggt gcaagtgtct ctagccaggt agccacattg tttccctctc ctgccttacc
     1681 cctgttggca gtgccagtgc aggccatgga gggatgtggt gctgggctat gtttactaaa
     1741 cctttgggtt ttcagcctct taagcccagc caggatctct catcgagttg aggcactagg
     1801 ctgactaacc tctggtgtct gataccagtg gggggtgctt gggtctgtgg gcggcagaag
     1861 gcgtttctcc tagcttggtg tcctctgctg actgctcttc ctgctgcctc tgactgctca
     1921 gccttgattt ggcatttagg ctgcccactg cccactggga ttgtctggca acatttgctc
     1981 tcccaagatc tttcatgcct cctggctgcc cctggggtag gagtggtggt gccgaagccc
     2041 ctcagactgg tgaaggacca ttgctgcttc tttctccttc cttcccaccc ctccttggct
     2101 ggcaacccag aaccctctga taacatcata ctccactcct ggccagagaa aaggacttga
     2161 ctagactttc tgaacttgaa cagtttcagg ttatatttta attttttttt gtacaggttg
     2221 attctaatac atttcaacat gcttttttct ccctttgtgt caatatttgt tatagtctaa
     2281 tcgccggtgt gtgtgtgtat gtaggtgggg gggattatat gcgtggggag tatggggtac
     2341 gggggtggtg ggtggttggg gtggaggggt agaggggtgt gtgtgtgtgt gtgtgtgtgt
     2401 gtgtgtgtgt gtgtgtgtgt gtattttgtt tcctaagggg agatagaaga cttgtactga
     2461 tttaaacctc attgagcttg aaaaagcaca ttttagc
//
