LOCUS       NM_001169121             552 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus coordinator of PRMT5 and differentiation
            stimulator (Coprs), mRNA.
ACCESSION   NM_001169121 XM_001075131 XM_214404
VERSION     NM_001169121.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Cui,W., Dai,X., Marcho,C., Han,Z., Zhang,K., Tremblay,K.D. and
            Mager,J.
  TITLE     Towards Functional Annotation of the Preimplantation Transcriptome:
            An RNAi Screen in Mammalian Embryos
  JOURNAL   Sci Rep 6, 37396 (2016)
   PUBMED   27869233
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Paul,C., Sardet,C. and Fabbrizio,E.
  TITLE     The histone- and PRMT5-associated protein COPR5 is required for
            myogenic differentiation
  JOURNAL   Cell Death Differ 19 (5), 900-908 (2012)
   PUBMED   22193545
REFERENCE   3  (bases 1 to 552)
  AUTHORS   Lacroix,M., El Messaoudi,S., Rodier,G., Le Cam,A., Sardet,C. and
            Fabbrizio,E.
  TITLE     The histone-binding protein COPR5 is required for nuclear functions
            of the protein arginine methyltransferase PRMT5
  JOURNAL   EMBO Rep 9 (5), 452-458 (2008)
   PUBMED   18404153
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CB614079.1.
            
            On or before Dec 16, 2009 this sequence version replaced
            XM_214404.4, XM_001075131.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB614079.1, FM062948.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-552               CB614079.1         1-552
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..552
                     /gene="Coprs"
                     /gene_synonym="Copr5; RGD1565675"
                     /note="coordinator of PRMT5 and differentiation
                     stimulator"
                     /db_xref="GeneID:290925"
                     /db_xref="RGD:1565675"
     exon            1..95
                     /gene="Coprs"
                     /gene_synonym="Copr5; RGD1565675"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..548
                     /gene="Coprs"
                     /gene_synonym="Copr5; RGD1565675"
                     /note="cooperator of PRMT5; coordinator of PRMT5,
                     differentiation stimulator"
                     /codon_start=1
                     /product="coordinator of PRMT5 and differentiation
                     stimulator"
                     /protein_id="NP_001162592.1"
                     /db_xref="GeneID:290925"
                     /db_xref="RGD:1565675"
                     /translation="MDPQAATGPGPGEPSAWEAPSAEAGLATADLSGGETETELDVDR
                     LASGAQSIPTDVPTHAEGPSSEEEGFAMEKEADGELYAWELSEGPACPPMEQASGLFN
                     EDWDLELKADQGNPYDADDVQGSISQEIKPWVCCAPQGDMMYDPSWHHPPPLIPHYSK
                     MVFETGQFDDAED"
     exon            96..162
                     /gene="Coprs"
                     /gene_synonym="Copr5; RGD1565675"
                     /inference="alignment:Splign:2.1.0"
     exon            163..378
                     /gene="Coprs"
                     /gene_synonym="Copr5; RGD1565675"
                     /inference="alignment:Splign:2.1.0"
     exon            379..552
                     /gene="Coprs"
                     /gene_synonym="Copr5; RGD1565675"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggcgcctgg ctgtgggcgg cccggcatgg accctcaggc agccaccggt ccggggccgg
       61 gcgagccgag tgcatgggag gcccccagcg cggaggctgg tcttgccaca gctgacctct
      121 ctggtgggga gacagagact gagctagacg tggaccgact agccagtgga gctcagagca
      181 tccctactga cgttcctacc catgccgagg gcccaagttc tgaagaggaa ggctttgcaa
      241 tggagaagga agcggatggg gaactgtatg cctgggagct gtcagaaggt ccagcctgcc
      301 cacccatgga acaggcttct ggtcttttta acgaggactg ggacttggag ctgaaagcgg
      361 accaagggaa tccttacgat gctgatgacg tccaagggag catttcccaa gagattaagc
      421 cgtgggtgtg ctgtgcacca caaggagata tgatgtatga ccccagttgg caccatccac
      481 ccccactgat accacattac tccaagatgg tctttgaaac aggacagttt gatgatgcag
      541 aagactaaaa gt
//
