LOCUS       NP_001026992             874 aa            linear   ROD 31-MAR-2024
DEFINITION  coatomer subunit gamma-1 [Rattus norvegicus].
ACCESSION   NP_001026992
VERSION     NP_001026992.1
DBSOURCE    REFSEQ: accession NM_001031822.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 874)
  AUTHORS   Kuliyev,E., Gingras,S., Guy,C.S., Howell,S., Vogel,P. and
            Pelletier,S.
  TITLE     Overlapping Role of SCYL1 and SCYL3 in Maintaining Motor Neuron
            Viability
  JOURNAL   J Neurosci 38 (10), 2615-2630 (2018)
   PUBMED   29437892
REFERENCE   2  (residues 1 to 874)
  AUTHORS   Hehnly,H., Xu,W., Chen,J.L. and Stamnes,M.
  TITLE     Cdc42 regulates microtubule-dependent Golgi positioning
  JOURNAL   Traffic 11 (8), 1067-1078 (2010)
   PUBMED   20525016
REFERENCE   3  (residues 1 to 874)
  AUTHORS   Cao,Z., Li,C., Higginbotham,J.N., Franklin,J.L., Tabb,D.L.,
            Graves-Deal,R., Hill,S., Cheek,K., Jerome,W.G., Lapierre,L.A.,
            Goldenring,J.R., Ham,A.J. and Coffey,R.J.
  TITLE     Use of fluorescence-activated vesicle sorting for isolation of
            Naked2-associated, basolaterally targeted exocytic vesicles for
            proteomics analysis
  JOURNAL   Mol Cell Proteomics 7 (9), 1651-1667 (2008)
   PUBMED   18504258
REFERENCE   4  (residues 1 to 874)
  AUTHORS   Moelleken,J., Malsam,J., Betts,M.J., Movafeghi,A., Reckmann,I.,
            Meissner,I., Hellwig,A., Russell,R.B., Sollner,T., Brugger,B. and
            Wieland,F.T.
  TITLE     Differential localization of coatomer complex isoforms within the
            Golgi apparatus
  JOURNAL   Proc Natl Acad Sci U S A 104 (11), 4425-4430 (2007)
   PUBMED   17360540
  REMARK    GeneRIF: analysis of differential localization of coatomer complex
            isoforms within the Golgi apparatus
REFERENCE   5  (residues 1 to 874)
  AUTHORS   Tsuji,A.B., Sugyo,A., Ogiu,T., Sagara,M., Kimura,T., Ishikawa,A.,
            Sudo,H., Ohtsuki,M., Aburatani,H., Imai,T. and Harada,Y.N.
  TITLE     Fine mapping of radiation susceptibility and gene expression
            analysis of LEC congenic rat lines
  JOURNAL   Genomics 86 (3), 271-279 (2005)
   PUBMED   15978772
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Aug 19, 2005 this sequence version replaced XP_216203.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC129074.1, SRR26643296.13647.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     Protein         1..874
                     /product="coatomer subunit gamma-1"
                     /note="coatomer subunit gamma; gamma-COP; gamma-coat
                     protein; gamma-1-COP; gamma-1-coat protein; coatomer
                     protein complex, subunit gamma 1"
                     /calculated_mol_wt=97483
     Region          1..21
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot (Q4AEF8.1)"
     Region          7..869
                     /region_name="SEC21"
                     /note="Vesicle coat complex COPI, gamma subunit
                     [Intracellular trafficking and secretion]; COG5240"
                     /db_xref="CDD:227565"
     Region          64..101
                     /region_name="HEAT 1"
                     /note="propagated from UniProtKB/Swiss-Prot (Q4AEF8.1)"
     Region          283..320
                     /region_name="HEAT 2"
                     /note="propagated from UniProtKB/Swiss-Prot (Q4AEF8.1)"
     Region          288..313
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          322..355
                     /region_name="HEAT 3"
                     /note="propagated from UniProtKB/Swiss-Prot (Q4AEF8.1)"
     Region          323..354
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          356..392
                     /region_name="HEAT 4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q4AEF8.1)"
     Region          363..397
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          398..423
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          435..461
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          471..501
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            594
                     /site_type="phosphorylation"
                     /note="Phosphothreonine.
                     /evidence=ECO:0000250|UniProtKB:Q9Y678; propagated from
                     UniProtKB/Swiss-Prot (Q4AEF8.1)"
     Region          609..874
                     /region_name="Interaction with ZNF289/ARFGAP2.
                     /evidence=ECO:0000250"
                     /note="propagated from UniProtKB/Swiss-Prot (Q4AEF8.1)"
     CDS             1..874
                     /gene="Copg1"
                     /gene_synonym="Copg"
                     /coded_by="NM_001031822.4:107..2731"
                     /db_xref="GeneID:297428"
                     /db_xref="RGD:1565292"
ORIGIN      
        1 mlkkfdkkde esgggsnplq hleksavlqe arvfnetpin prkcahiltk ilylinqgeh
       61 lgtteateaf famtklfqsn dptlrrmcyl tikemsciae dviivtsslt kdmtgkedny
      121 rgpavralcq itdstmlqav erymkqaivd kvpsvsssal vsslhllkcs fdvvkrwvne
      181 aqeaassdni mvqyhalgll yhvrkndrla vskmiskftr hglkspfayc mmirvaskql
      241 eeedgsrdsp lfdfiesclr nkhemvvyea asaivnlpgc sakelapavs vlqlfcsspk
      301 aalryaavrt lnkvamkhps avtacnldle nlvtdsnrsi atlaittllk tgsessidrl
      361 mkqissfmse isdefkvvvv qaisalcqky prkhavlmnf lftmlreegg feykraivdc
      421 iisiieense sketglshlc efiedceftv latrilhllg qegpktnnps kyirfiynrv
      481 vleheevrag avsalakfga qneemlpsil vllkrcvmdd dnevrdratf ylnvleqkqk
      541 alnagyilng ltvsipglek alqqytleps ekpfdlksvp lattpmteqr peststaavk
      601 qpekvaatrq eifqeqlaav pefqglgplf ksspepvalt eseteyvirc tkhtfsdhlv
      661 fqfdctntln dqtlenvtvq mepteayevl syvpvrslpy nqpgtcytlv alpkedptav
      721 actfscvmkf tvkdcdpntg eideegyede yvledlevtv adhiqkvmkv nfeaawdevg
      781 defekeetft lstiktleea vgnivkflgm hpcersdkvp enknthtlll agvfrgghdi
      841 lvrsrlllld tvtmqvtars seelpvdiil asvg
//
