LOCUS       NM_001401178             844 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus COMM domain containing 4 (Commd4), transcript
            variant 1, mRNA.
ACCESSION   NM_001401178 XM_006243133
VERSION     NM_001401178.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Feb 3, 2022 this sequence version replaced XM_006243133.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643294.32836.1, CF978348.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760475 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-40                JAXUCZ010000008.1  66465614-66465653   c
            41-112              JAXUCZ010000008.1  66464419-66464490   c
            113-178             JAXUCZ010000008.1  66464128-66464193   c
            179-218             JAXUCZ010000008.1  66463897-66463936   c
            219-338             JAXUCZ010000008.1  66463345-66463464   c
            339-419             JAXUCZ010000008.1  66463081-66463161   c
            420-596             JAXUCZ010000008.1  66462568-66462744   c
            597-844             JAXUCZ010000008.1  66462188-66462435   c
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..844
                     /gene="Commd4"
                     /note="COMM domain containing 4"
                     /db_xref="GeneID:363068"
                     /db_xref="RGD:1306104"
     exon            1..40
                     /gene="Commd4"
                     /inference="alignment:Splign:2.1.0"
     CDS             38..637
                     /gene="Commd4"
                     /note="isoform 1 is encoded by transcript variant 1; COMM
                     domain-containing protein 4"
                     /codon_start=1
                     /product="COMM domain-containing protein 4 isoform 1"
                     /protein_id="NP_001388107.1"
                     /db_xref="GeneID:363068"
                     /db_xref="RGD:1306104"
                     /translation="MRFRFCGDLDCPDWVLAEISTLAKISSVKLRLLCSQVLKELLGQ
                     GIDYEKILKLTADAKFESGDVKATVAVLSFILSSAAKHSVDSDSLSSELQQLGLPKEH
                     ATSLCRCYEEKQSPLQEHLRACSLRVNRLASVGWRVDYTLSSSLLHSVEEPMVHLQLQ
                     LVPAPGSLAQHVSMSLSADKFQVLLAELKQAQTLMTALG"
     exon            41..112
                     /gene="Commd4"
                     /inference="alignment:Splign:2.1.0"
     exon            113..178
                     /gene="Commd4"
                     /inference="alignment:Splign:2.1.0"
     exon            179..218
                     /gene="Commd4"
                     /inference="alignment:Splign:2.1.0"
     exon            219..338
                     /gene="Commd4"
                     /inference="alignment:Splign:2.1.0"
     exon            339..419
                     /gene="Commd4"
                     /inference="alignment:Splign:2.1.0"
     exon            420..596
                     /gene="Commd4"
                     /inference="alignment:Splign:2.1.0"
     exon            597..844
                     /gene="Commd4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aagccggaag aagccctgga ttgggtctcc tgacatcatg aggttccggt tctgtggcga
       61 tctggactgt cccgattggg tcctagcaga gatcagcaca ctggccaaaa tttcctctgt
      121 gaagctgcgg ctactgtgta gccaggtgct aaaggagctt ctgggacagg ggattgacta
      181 tgagaagatc ctgaagctta ctgctgatgc caagttcgag tctggagatg tgaaggccac
      241 ggttgcagtg ctgagtttca tcctctccag cgccgccaag catagcgtgg acagtgattc
      301 cttgtccagt gagctgcagc agctggggct gcccaaagag catgccacca gcctgtgccg
      361 ctgttatgaa gagaagcaga gccccctaca ggagcacctt cgggcctgta gcctacgtgt
      421 gaacaggctg gccagcgtgg gctggcgggt agactacacc ctgagctcca gcctgctaca
      481 ttctgtggag gagcccatgg tacacctgca gctacagctt gtgcctgctc caggttccct
      541 ggcccaacac gtttccatgt ccctctcagc agacaagttc caagttctcc tggcagaact
      601 gaagcaagcc cagaccctga tgactgcttt gggctgagaa gggtgttcct agcctctgtg
      661 gagccgccct gcctgcactg agtggctccc ctccacactc ctcttgcaag ggtggccctt
      721 ggcctcttga gtcctgggtg gggctactgg ggatcgtccc cagaattgcc ttctttcttt
      781 tgaaagaaag tacttgtcaa ccattgttat gggcaataag aataaacaag tgtacagcac
      841 tgtg
//
