LOCUS       NM_001109503            2382 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus COMM domain containing 2 (Commd2), mRNA.
ACCESSION   NM_001109503 XM_001066032
VERSION     NM_001109503.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474003.2.
            
            On Oct 4, 2007 this sequence version replaced XM_001066032.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ229674.1, FN801408.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q26"
     gene            1..2382
                     /gene="Commd2"
                     /note="COMM domain containing 2"
                     /db_xref="GeneID:688478"
                     /db_xref="RGD:1588810"
     exon            1..126
                     /gene="Commd2"
                     /inference="alignment:Splign:2.1.0"
     CDS             60..659
                     /gene="Commd2"
                     /codon_start=1
                     /product="COMM domain-containing protein 2"
                     /protein_id="NP_001102973.1"
                     /db_xref="GeneID:688478"
                     /db_xref="RGD:1588810"
                     /translation="MLLDLSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGSNPKIY
                     EGAARKLNVSSDTIQHGVEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQL
                     YLDNRKEIRTILNELAPRLPSYHSLEWRLDVQLASRSLRQQMKPAVTIKLHLDQSGDH
                     STHCLQTDPATLLHLVQQLEQALEEMKTNHCRRVVRSIK"
     exon            127..204
                     /gene="Commd2"
                     /inference="alignment:Splign:2.1.0"
     exon            205..287
                     /gene="Commd2"
                     /inference="alignment:Splign:2.1.0"
     exon            288..461
                     /gene="Commd2"
                     /inference="alignment:Splign:2.1.0"
     exon            462..2382
                     /gene="Commd2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggtcggaagt ggtgagggcg gggccggcgc cgagtggcga agtcagaaga cttgctaaga
       61 tgctgctgga tttgtccgag gagcacaagg agcacctggc cttcctgccg caagtggaca
      121 gcgcggtggt cgccgagttt gggaggatcg ccgtggagtt cctcagacgg ggatcaaacc
      181 cgaagatcta tgaaggcgcc gccagaaaac tcaatgtgag tagcgacact atccagcatg
      241 gtgtggaagg attaacatat ctcctcacgg agagctcaaa gctcatgatt tctgaactgg
      301 atttccaaga ctctgttttt gttctgggat tctctgaaga actgaacaaa ctattgcttc
      361 agctctacct ggacaataga aaggagatca gaactattct gaacgagtta gcaccgcgcc
      421 ttcccagcta ccacagcctt gagtggcggc tagatgtaca gcttgcaagc agaagtctcc
      481 ggcaacaaat gaagccagca gtgactataa agctgcacct ggaccagagc ggcgaccaca
      541 gcactcactg tctgcagaca gacccggcta ccctgcttca cctggttcag cagctggagc
      601 aagccttaga ggaaatgaaa acaaaccact gcaggagagt ggtccgaagc atcaagtagc
      661 ctgaggtccc cttccttccg gctggcagtt caggagtggc agtggtacat ctgcactcca
      721 tggagcttct tttcctgctc gatcagaagc tgaaccacag ttcccttttg gtgctaaatg
      781 cagtcagcct cttgacagat tgagaacatt tagtatttga agtgtgtaaa taggatggac
      841 caactaaaat gaatcagtac tgttcgtgtg ttctgtgtat atgggactct ttggacttgg
      901 atattttctt atctgcttta tttcctttgt cctcgatcaa aatttgaaaa taaaattcac
      961 tgttactact tagaactctt tctagacagt tcagtatctt tgcttctaaa agcactatac
     1021 aattacagcc atagaaaaag gcaaatagga cttttacaag cttttctata ttgttacagg
     1081 tagtgtgtgt attcttgttt gtatgtaaag atgataagta gcatttacca tattgcttac
     1141 gtttgagtca tgggggctaa ttgatgtaag tgatatacaa atttgtgtga tcctaatgta
     1201 cattttatca gggactaaag taactaaaag gcacaccatt gtttagattt ataaacaatg
     1261 atgtaagagt agactaatca attctttttt atatttgctt atttagtgtg tatgagtgtt
     1321 tttgcgtaca tgtatgtctg tgtaccacat gtgttcagtg cacacagagg ctagatgagg
     1381 tattggatca cttagagcta gacttagaaa gcgctttgct tccgttgtgt gctgaggctc
     1441 aaacccaggt cttctacaag agcagtcagt gctcataatc accaaaccat ctctccagcc
     1501 ccaaagtagg ttttgttttt taatatttat tttgtttgtg tgtgtttaga tccaaagtct
     1561 aaagttagtg agttagtttt ctcttcctat cctatggctc tttgggatag aattcaggtc
     1621 atcaggcata ttgacaaaaa cttttaaccc agtagttatc ttaaatacat agacataatt
     1681 tttaattaca ccaagaacta agttaatgaa gctgccacat taacaaaccc acaagcgaag
     1741 gaaaccatga tttagcaatg catgtcactg ggtttaaagg tagcctgcct gccagtctat
     1801 gtgatagctc tgtgaggttc actgtctaca gctgacagca gatgagctgg actggcccca
     1861 ccagtattga actgttagcc tgtgtccctc caatcgacct ttcttccacc tcttgactca
     1921 ttgctctttg gccaatcaaa agatgaaaga attgacacgg tggtgcatga ctgtaattct
     1981 agtgcctggg acatctctga gttccaaggc cactcggtct gcataacaga ttctaggcca
     2041 actagtccct gtctacacag acacacacac acacacacac acacacacac acacacacac
     2101 acacacacac acccaagaaa aaagcatatg ctacttaaaa aaggaagaga aaaatccagt
     2161 tctcatgact gttctctgta tgcattttat ctgtgatgat gggctctctt ggggacaaag
     2221 aaggatcgtt agtaatccct ttcccctccc tgtacacacc tcttagatct tgtacaccat
     2281 caagtaagca tatccctttg tttttctcag acattgtttt atgacgcatt tggtaatttt
     2341 caattcttaa taacttttta aaaataaatt agcatacaaa tg
//
