LOCUS       NM_001106182            2099 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus component of oligomeric golgi complex 8 (Cog8),
            mRNA.
ACCESSION   NM_001106182 XM_001074828 XM_214673
VERSION     NM_001106182.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Loh E and Hong W.
  TITLE     The binary interacting network of the conserved oligomeric Golgi
            tethering complex
  JOURNAL   J Biol Chem 279 (23), 24640-24648 (2004)
   PUBMED   15047703
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC098009.1 and CO395229.1.
            
            On Oct 13, 2007 this sequence version replaced NM_001106182.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168966.1, SRR8487226.199960.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-922               BC098009.1         1-922
            923-967             CO395229.1         373-417
            968-2099            BC098009.1         931-2062
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..2099
                     /gene="Cog8"
                     /note="component of oligomeric golgi complex 8"
                     /db_xref="GeneID:291990"
                     /db_xref="RGD:1307074"
     exon            1..403
                     /gene="Cog8"
                     /inference="alignment:Splign:2.1.0"
     CDS             9..1913
                     /gene="Cog8"
                     /codon_start=1
                     /product="conserved oligomeric Golgi complex subunit 8"
                     /protein_id="NP_001099652.1"
                     /db_xref="GeneID:291990"
                     /db_xref="RGD:1307074"
                     /translation="MAAALSLQPSTTASATTTATAAALGEVEDEGLLASLFRDRFPEA
                     QWREKPDVGRYLRELSGSGLDRLRREPERLAEERAQLLQQTRDLAFANYKTFIRGAEC
                     TERIHRLFGDVEASLGHLLDRLPSFQQSCRNFVKEAEEISSNRRMNTLTLNRHTEILE
                     ILEIPQLMDTCVRNSYYEEALELAAYVRRLERKYSSIPVIQGIVNEVRQSMQLMLSQL
                     IQQLRTSIQLPACLRVIGYLRRMDVFTEAELRVKFLQARDAWLRSILTAIPNDDPYFH
                     ITKTIEACRVHLFDIITQYRAIFSDEDPLLPPAMGQYTVNEGAIFHGWVLQKISQFLQ
                     VLETDLYRGIGGRLDSLLGQCMYFGLSFSRVGADFRGQLAPVFQRVAINTFQKAVEEA
                     VEKFQDEMTSYTLISAAAILGSSNMPAAVPATQPGTLQPPMVLLDFPPLACFLNNILV
                     AFNDLRLCCPVALAQDVTGALEDALMKVTKTILAFHRAEEAVFSSGEHEIFVQFCTAF
                     LEDLVPYLNRCLQVLFPPAQIAQTLGISPTQLSKHGNLGHVNISAIQEPLAFILPKRE
                     AVFCLDDQELVPDLVAPAPELPAEQRSLEPIASATLESGSEKGESGEPLPQEPVEGEP
                     LPAEPPSEEP"
     exon            404..611
                     /gene="Cog8"
                     /inference="alignment:Splign:2.1.0"
     exon            612..1439
                     /gene="Cog8"
                     /inference="alignment:Splign:2.1.0"
     exon            1440..1608
                     /gene="Cog8"
                     /inference="alignment:Splign:2.1.0"
     exon            1609..2072
                     /gene="Cog8"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtggaaagat ggcagctgct ctgtctctcc agccctccac gacagcttct gccacgacaa
       61 cagccacagc agctgcgctg ggggaggtgg aagatgaagg actcctggcg tcgctattcc
      121 gcgaccgctt ccctgaggcc caatggcgtg agaaacccga cgtgggccgc tacctccggg
      181 agctgagcgg ctccgggctg gaccggctgc gtcgcgaacc ggagcgcctg gcggaggagc
      241 gggcccagct gctgcagcag acgcgggacc tggccttcgc caattacaag acgttcattc
      301 gcggtgcgga atgcaccgag cgcatacacc gtctctttgg agacgtggag gcgtccctcg
      361 ggcacctgct cgaccgttta cccagcttcc agcagagctg caggaacttc gtgaaggaag
      421 ctgaggagat cagctccaac cgccggatga ataccctgac tctaaatcgg cacacggaaa
      481 tcctggagat tttagagatt ccccagctta tggacacctg tgtccgaaac agctattatg
      541 aagaggcact ggagcttgca gcctatgtac ggcgactgga aaggaaatac tcctccatcc
      601 ctgttatcca gggcattgtg aatgaagttc gccagtccat gcagctgatg ctaagccagc
      661 tgatccaaca gctgaggacc agcatccagc tcccagcctg cctgcgtgtc attggctatc
      721 ttcgacgcat ggatgtcttc actgaggctg agttgagggt gaaatttctt caggcccggg
      781 acgcttggct tcgctccatc ctgactgcca tcccgaatga tgatccttac ttccatatca
      841 caaagactat tgaggcttgc cgcgtccatc tctttgatat catcacacag taccgtgcca
      901 tcttctcaga tgaggacccc ctgctgccac ctgccatggg ccagtacact gtgaatgagg
      961 gtgccatctt ccatggatgg gtgttacaga aaatctcaca gttcctgcag gtgctggaga
     1021 ccgaccttta ccggggtata ggtggccgcc tggactctct gcttggacag tgcatgtact
     1081 ttgggctgtc ctttagccgg gtgggggctg atttccgtgg ccagttggct cctgttttcc
     1141 agagggtggc aatcaatact ttccagaaag cagttgaaga agctgtggag aaattccagg
     1201 atgagatgac ttcatacacc ctcatctcag ctgcagccat cctgggcagc agcaacatgc
     1261 ctgctgcagt gccagccaca cagccaggga cgctgcagcc accaatggtg ctcttagact
     1321 tcccacctct cgcctgcttc ctcaacaaca ttttggttgc tttcaatgat ttacgtctct
     1381 gttgccctgt ggccctagca caggatgtaa ctggggcctt ggaggacgcc cttatgaagg
     1441 taaccaaaac aatcctagca ttccatcgtg cagaagaggc tgtgttcagc agtggggagc
     1501 atgagatctt tgtccagttc tgcactgcct tcctggaaga ccttgttcct tatttgaacc
     1561 gctgtcttca agtccttttc ccaccagctc agatagccca gactttaggc atttcaccca
     1621 cccagctctc caagcacgga aaccttggac atgtgaatat cagcgccatc caggaacctc
     1681 tcgcctttat cttgcctaag agagaggcag ttttctgttt agatgaccag gagctagtgc
     1741 cggacctcgt ggccccagct ccagagcttc ctgcggagca gcgcagcctg gagcctattg
     1801 cttcagcgac cctcgagagc gggtcagaga agggagaatc aggggaaccg ctgcctcagg
     1861 agcccgtgga gggggagccg ctgccggccg agccaccgag tgaggagcca taggcagtta
     1921 ttccctgtcc ccaggctggg gagcggacta agggcacggc gctgccggcg gcttctggag
     1981 agggaaggtg tgtgcagttg ggggactgct ttgcctagaa taaagcagag acctgtggaa
     2041 cttgagagct ttaataaaac cgaacgactg tcaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
