LOCUS       NM_001197217            2501 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus cyclin N-terminal domain containing 1 (Cntd1),
            mRNA.
ACCESSION   NM_001197217
VERSION     NM_001197217.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2501)
  AUTHORS   Holloway,J.K., Sun,X., Yokoo,R., Villeneuve,A.M. and Cohen,P.E.
  TITLE     Mammalian CNTD1 is critical for meiotic crossover maturation and
            deselection of excess precrossover sites
  JOURNAL   J Cell Biol 205 (5), 633-641 (2014)
   PUBMED   24891606
REFERENCE   2  (bases 1 to 2501)
  AUTHORS   Girard,A., Sachidanandam,R., Hannon,G.J. and Carmell,M.A.
  TITLE     A germline-specific class of small RNAs binds mammalian Piwi
            proteins
  JOURNAL   Nature 442 (7099), 199-202 (2006)
   PUBMED   16751776
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000010.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence. The genomic coordinates used for the transcript
            record were inferred from mouse NM_026562.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.66229.1,
                                           SRR26643287.25688.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-278               JAXUCZ010000010.1  86721692-86721969
            279-354             JAXUCZ010000010.1  86726588-86726663
            355-520             JAXUCZ010000010.1  86726893-86727058
            521-683             JAXUCZ010000010.1  86727898-86728060
            684-828             JAXUCZ010000010.1  86729006-86729150
            829-925             JAXUCZ010000010.1  86729920-86730016
            926-2501            JAXUCZ010000010.1  86730499-86732074
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..2501
                     /gene="Cntd1"
                     /gene_synonym="RGD1564542"
                     /note="cyclin N-terminal domain containing 1"
                     /db_xref="GeneID:498001"
                     /db_xref="RGD:1564542"
     exon            1..278
                     /gene="Cntd1"
                     /gene_synonym="RGD1564542"
                     /inference="alignment:Splign:2.1.0"
     CDS             110..1093
                     /gene="Cntd1"
                     /gene_synonym="RGD1564542"
                     /codon_start=1
                     /product="cyclin N-terminal domain-containing protein 1"
                     /protein_id="NP_001184146.1"
                     /db_xref="GeneID:498001"
                     /db_xref="RGD:1564542"
                     /translation="MEGPLRPRLVNCSDFQFGVVATETIENALLHLAQQNEQAVKEAA
                     GRSGSFRETRIVEFVFLLSEQWCLEKSVSYQAVEILERFMVKQAENICQQATLQLRSN
                     ELQSWRALKEQLSNKFILRLVSCVQLASKLSFHYKIVSNITVLNFLQALGYGYTKEEL
                     LESELDILKSLNFQINLPTPLAYVEMLLEVLGYNGCLVPATQLHATCLTLLDLVYLLH
                     EPIYESLLRASIENSPPSQLQGEKFISVKEDFMLLAVGIIAASAFIQNHECWSQVIGH
                     LQSITGIASESIAEFSYAILTHSVGANTPGQQHPVPHKAARALRTAASSNT"
     exon            279..354
                     /gene="Cntd1"
                     /gene_synonym="RGD1564542"
                     /inference="alignment:Splign:2.1.0"
     exon            355..520
                     /gene="Cntd1"
                     /gene_synonym="RGD1564542"
                     /inference="alignment:Splign:2.1.0"
     exon            521..683
                     /gene="Cntd1"
                     /gene_synonym="RGD1564542"
                     /inference="alignment:Splign:2.1.0"
     exon            684..828
                     /gene="Cntd1"
                     /gene_synonym="RGD1564542"
                     /inference="alignment:Splign:2.1.0"
     exon            829..925
                     /gene="Cntd1"
                     /gene_synonym="RGD1564542"
                     /inference="alignment:Splign:2.1.0"
     exon            926..2501
                     /gene="Cntd1"
                     /gene_synonym="RGD1564542"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggaagggaa ggaggaatcc aaggtgtgac agaagattct ggaaataagc taaagaagcc
       61 agtttatgga tcccgtgaac tgtgcaagtg ctccgaaaga gttctgaata tggaaggacc
      121 cttgaggcca agactggtta actgcagtga ctttcagttt ggagtggttg ccacagagac
      181 catcgaaaat gctctgcttc acttggccca gcagaatgag caagcagtga aggaggctgc
      241 cggacggtca ggcagcttca gggagacccg gatcgttgag tttgtctttc tcctgtctga
      301 acaatggtgt ctggagaaat cggtgagcta ccaggccgta gaaatcctag aaaggtttat
      361 ggtgaagcag gcagagaaca tctgtcagca agccacactc cagctgagaa gtaacgagct
      421 gcagagctgg agggctctga aagagcagct ctccaacaag tttatcctcc gtctggtgtc
      481 gtgtgtgcag ctggccagca aactgtcttt ccactacaaa attgtcagca acatcacagt
      541 cctcaatttc ctccaggccc ttggttatgg atacaccaaa gaagagctgc tagaatcgga
      601 gcttgatatt ttgaagtccc tgaacttcca aataaatctg cccacaccgc tggcatatgt
      661 ggagatgctc cttgaagttc tagggtacaa tggctgtttg gtccccgcca cacaactaca
      721 tgcaacgtgt ctgaccctcc tcgacctggt ctatcttctg cacgagccca tctatgagag
      781 cctcttgaga gcttcaatcg agaattctcc acccagtcag ctgcaggggg aaaagtttat
      841 ctctgtgaag gaagacttta tgctgttggc agttggcatc attgcagcga gcgccttcat
      901 ccaaaaccat gaatgctgga gccaggtcat agggcatttg cagagcatca cgggcattgc
      961 ctcggaaagc attgctgagt tctcttacgc aatcctgact cacagcgtgg gagcaaacac
     1021 ccctgggcaa cagcaccctg ttccccacaa ggccgccaga gctctgagga ctgctgcttc
     1081 ctctaacaca tgaggctggc tgagctgcac caccttctgt cactgaaccc ccttccttgt
     1141 ttactttcat actcagggaa caaaaattcc aagtttcctt tgaacagtgt tttgtatttc
     1201 aatttcaggc atgttatttt tttctacatc agagatagtt atgggagaca aacatatctg
     1261 ttgtgtcatg gtaggctaaa aaaacatcaa agaattggac cagagttaga ttgtgaaatt
     1321 ggtccatttt tgtttgacaa gacttttaaa ttttcctaat ttaatctaag aggtaatatc
     1381 acatagaaat aagtatttct gaggacttta aaacactttt ggatgacctt gaccaagtgt
     1441 ctctgaggta gcctttcttc ccttgctcct gctacagctg gtttttttgt tttgctttgt
     1501 tgttttaaag atttatttat tttatgtata tgaatgcagt gttgctctct tcagacacac
     1561 cagaagaggg catcagatcc catgtcagat ggttgtgagc caccatgtgg ttgctgggaa
     1621 ttgaactcag gacctctgga agagcagcca gtgctcttaa ccactgagtc tccagccctt
     1681 gttttgtttg ttattcccac ccccccactt ttgttttttt tcttttttct ttttttcgga
     1741 gctggggacc gaacccaggg ccttgcgctt cctaggcaag tgctctacca ctgagctaaa
     1801 tccccagccc ccacttttgt tttttaaaga cagggtctca ctattcagcc ctggctgtct
     1861 tgcagctcac tgaatacacg agactaggct ggaattcaga ggtccactcg cctttgcttc
     1921 ctgagtgctg gagctaaata ccctcattct ggctcttttt tttttttaag ctaagacatg
     1981 tttcaacaga atctctaccg aactgactga aactcagttc ttccaaaata caaaatactc
     2041 aactttaagg aaaaacatcc tggcgtacca cttggtaatt aatagaccat agcaaatcct
     2101 ttattacaaa taattaaatc cttccacatc tcaaacagta tcaaacagca ttttgtaatt
     2161 ccaatagtta gcacagtaag cgttcaatac tagaagtgag gacagagtta aacctttacc
     2221 tcttgtccct tccccacatt acccaactgt gtgccacaag catctcatct caaaactttt
     2281 ctgtttcaag tacaggaagt tgagagagat aaaatccagt gaaaacacat taatgtcaat
     2341 tcaacttaaa aaagaaaaca aagcaaattt aaattagttg tttccaggga agagggaaag
     2401 gacagcatgg ggttgagcca aactacggca gggctctttg ctatacatgg cgtgctgtgc
     2461 tctgaaaact gtcatattgt aaaataaagt agcttttgtg g
//
