LOCUS       XM_573525               4690 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus consortin, connexin sorting protein
            (Cnst), transcript variant X1, mRNA.
ACCESSION   XM_573525
VERSION     XM_573525.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_573525.8.
            
            On Jan 21, 2021 this sequence version replaced XM_573525.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4690
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4690
                     /gene="Cnst"
                     /note="consortin, connexin sorting protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 51 ESTs, 2 long SRA reads, 4 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 207 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:498297"
                     /db_xref="RGD:1564833"
     CDS             83..2443
                     /gene="Cnst"
                     /codon_start=1
                     /product="consortin isoform X1"
                     /protein_id="XP_573525.5"
                     /db_xref="GeneID:498297"
                     /db_xref="RGD:1564833"
                     /translation="MLLGPAASREGCAEGGGAGRLEVSDSPVRRETRAGGVTARRPPC
                     QRAGLETDSAPGCSPCDASDAQAWKDFDKTLNSSTKDALMDDSDSPTYSLQIEPQDGC
                     HPGDSVERRVTRLPSVSDENENQLAGDGPALLTTSDGAMGRAAVSEQDSLNNNESCLS
                     SCEAAPRDNSEGPKDDPPSLGEDTKPPGKRSPRAKRGAPKSSAPPGDGVTQMPNAASQ
                     AAGEEEAAGVNANDPPKAAALQPLFSLIRGEVEQMDSRALPLFLHQVAETYFQEEDYE
                     KAMKFIQLERLYHEQLLANLSAIQEQWETKWKSVQPSTKKPLRNSEKGFNGEDFEQLA
                     KICTTHQDPLLSKLKIVPVEQSPGKKGFPRVTMSDEPMERGATAKEPEIETCPGTGPS
                     GGRHEEEPQESSPDCPQMNWQTASPDLPGTAGKAHTEAEALPNTTLELHTQSPEAAGS
                     RSGAAAAENACEDDSCVQAPPTEDHPDVARAPKEVPPSEPVAEPFPSGDIAPPGLISG
                     GKYSQTHRKELCLPLQDTFEALPRDQHCNSEVAKPRQPDVTASDGKSAQSQTGLETGP
                     ESALCGDRKASDVSTLCPEVCMAPEERGDREEQVSKETEDYLNSLLEGCLKDVEDSLS
                     YESIQDDDDSDLLQDLSPEEASYSLQENLPPEESALSLDDLAKKIEIAEAIPAEGLVS
                     ILKKRNDAVGGHPAQMQQKPSKRRVRFQEIDDNLDQDEVGGGSCVLLILLCIATVFLS
                     VGGTALYCTLGDMESPVCTDFADNVDFYYTKLLQGVAGLKHWVYLS"
ORIGIN      
        1 agtggactct ccgggtgtgt ccgggctgga actctatggt cgcccgccct ccgcacttcc
       61 tctctagccg cgatctcact ctatgctcct cggtccggcg gccagccggg aggggtgcgc
      121 agagggaggc ggggcgggaa ggctagaggt gtctgattct ccagtgcggc gggagacccg
      181 agccggcggt gtgacagctc gtcggccgcc atgtcagcga gccgggctgg aaacagactc
      241 ggcgcccggc tgtagccctt gcgatgcctc ggatgcccag gcatggaagg actttgacaa
      301 gacgctaaac agttcaacaa aagatgcgct aatggatgac agcgactctc ctacatacag
      361 tctgcagata gagccacaag atggatgtca tccgggggac agcgtggaaa ggagagtgac
      421 acgcttgcct tctgtctcag atgaaaatga aaatcagctt gccggagacg ggcctgcact
      481 tctgaccacc agtgacggtg ccatgggaag agctgcagtg tctgagcagg acagtctcaa
      541 caataacgaa agctgcctgt ccagctgtga ggcagccccc agggacaact cagaaggtcc
      601 caaagatgac ccgccttcct tgggtgagga cacaaagcca cctggaaaaa gaagtccaag
      661 ggccaaaaga ggcgccccta agagctcagc acctccaggt gatggtgtta cacagatgcc
      721 gaatgcagcc tcacaggctg ccggtgagga ggaggctgcc ggagtgaacg caaatgaccc
      781 acccaaagca gcagcactgc agccactctt ctcgctgatc cgaggagagg tggagcagat
      841 ggactctagg gcgcttcccc tcttcctcca ccaggtagcg gagacctatt tccaggaaga
      901 ggactatgag aaagcaatga aattcattca gcttgaacga ctgtatcatg agcaattgct
      961 tgccaatctt tctgccattc aggaacagtg ggaaacaaaa tggaaatctg tccagccaag
     1021 caccaagaag cctctgagga attcagaaaa gggatttaat ggtgaagatt ttgaacagct
     1081 tgctaaaatt tgcacaactc atcaagaccc tctcttgtcc aagcttaaga tagtacctgt
     1141 ggagcagtca ccagggaaga aaggctttcc gagggtgaca atgtctgacg agccgatgga
     1201 gagaggagca acagccaaag agccagagat tgaaacctgc cccggcacgg gtccaagtgg
     1261 aggccggcat gaggaggagc cccaggagag cagccctgac tgtcctcaga tgaactggca
     1321 gacagcttcc cccgaccttc caggaactgc agggaaggcg cacacggagg cggaggcgct
     1381 gcccaatacc acactggagc tccacaccca gtccccagag gcagctggga gcaggtcagg
     1441 ggcagctgct gcggagaatg cctgtgagga tgacagctgt gtgcaggcgc ctcccacaga
     1501 ggaccaccct gatgtggcca gagcccctaa ggaggttcct cctagtgagc cagtggcaga
     1561 gccgttccca agcggtgaca ttgcaccgcc tgggttgatt tcagggggta aatattcaca
     1621 gacacaccga aaagaactct gccttccact ccaggacaca tttgaagcgc tgcccaggga
     1681 ccagcattgc aacagtgagg tagccaagcc acggcagcct gatgtcactg ccagtgatgg
     1741 gaaatcagca cagagtcaga ctggcttgga gactggtcct gagagcgcac tttgtggtga
     1801 caggaaagcc tctgacgtaa gcaccctgtg cccagaagta tgtatggccc cagaagaaag
     1861 gggggatagg gaagagcaag taagcaagga aacggaagac tatttgaaca gccttctgga
     1921 aggatgctta aaggatgtgg aagactccct gtcctatgag agcatccagg acgacgacga
     1981 ctccgacctc ctccaagacc tctctcctga agaagcctcc tacagtctcc aggagaatct
     2041 gcctcctgag gagagcgcgc tctccctgga tgatctggcc aagaagatag agatcgcaga
     2101 ggccattcct gcagaagggc tggtgtccat actgaagaag aggaatgatg cagtaggcgg
     2161 ccatcctgcc caaatgcagc agaagccgtc caagcgcaga gtgcggttcc aggaaataga
     2221 cgataacctg gaccaagatg aagtcggcgg tggctcctgt gtcctgctca tcttgctgtg
     2281 catagccacc gttttcctca gcgttggagg gacggcgctc tactgcactc tgggtgacat
     2341 ggagtcacct gtttgtacgg actttgctga caacgtggac ttctattaca ctaagctgct
     2401 gcagggggtg gcagggctta aacactgggt ctacctctcc tagcagcaag ggtgacaggc
     2461 gtgacaggaa tgctgacaga caaagaagat gcaaacttcc ccgacagctt ttatttcaga
     2521 agtcatgtat tccccctccc tggcttcaag gacccaagga cggacgttag aaacagcaac
     2581 atcgaagaac agcagcccag agagcacgtt agaataatcc ccagcagaag gcagtgctga
     2641 cacaggccct gaggacagag ggagggagcc ttggcgagca tgcccaagtc tttgccttcc
     2701 tagtgtcctg tggggcttac actgagggct aaaggacact cctggtttac agtcgtgctc
     2761 cgagggcatt gcctcccgcc atcatgcaat aagttccttt gtcatcagag agagtcacct
     2821 tatggcttca gtgccatttt ttagttaatc ttgggagctg tgtaacttaa gccttgggca
     2881 ttactctaga ttctggtctt catttgtgaa atggttgtgt gggtgtgtgg aggtctaaag
     2941 cagtgatctc aagtggatag ctggcatagg atacaaagat tacctttatt cttttaactt
     3001 gacgacaatg tgcaggcaca aatctttgga aaaggcttac ctgtgaacta gataaactgt
     3061 agaaactttg gccctgaact gaggaactaa cagaactgtg gcaatgaact tgacaggcct
     3121 gaaggcacag tgacagaaat cccagttccc aggtgagatt tcaccctggc ttctaagctg
     3181 cctcaagtgt tgattgctca gagaaactca ctgaacatct gttgtgtttc tgagaacctc
     3241 aggataggag cccagaaagg cacagttcct tgtgcaggtg tctatggaag gtggacccat
     3301 actttgatga ctcaaacagg ctaccacatg tatgagtaat ctcaggctat acacttaggt
     3361 gtgcagaatg tgggtgtcta tcatgggctc attttagact gcctcatgag ggcctcacac
     3421 cgtaaagaga caaaggtcta gccgtgttta attccgtcat tagatggcct tccctcattt
     3481 gtggtacagt gatctctcgc ttaggaaact ttgacttttt atattctagg taacatctgt
     3541 ttttaaaaat catgaattat agttttttag caagtgatca ttatgttctg ttttcccatt
     3601 aggatcattt ggaaggaaga gagagaaatt gctttgtaga tgttactggc tggcacagta
     3661 ccttcctttg cgtttctgcc tatttatttg gagcgtggat ttaaggggct tttttatgag
     3721 ttgcgcgtgt gccactgagc atgcgtccct tcgtcccact gctgcctatt taattagaca
     3781 ctcagagttt ggattttgta ccatttcagc tccgtatgtc tctaggcttc ttttgaaatt
     3841 gagtttttat tttcactgac aatactgcgt ggcttatctc ttatcatgtc accataaact
     3901 gtaatatttt cgatggttct agatcagagt tatttattta gaagtataca gaatactgaa
     3961 atttagattc cttataccta aggctgattt tattagaaga ttattttaat gtcctatata
     4021 aattttaaga ctttgtattc atatcatatg taaaataggg cccattgtcc tgatactatg
     4081 gttctgtaga agccactagt aaggtcaccc gtgcaggctc ctctcgacac aaacctgttt
     4141 caccctcgtg atttctagtt gcagggattt ggtgattttt gtttctgcca attttatgtc
     4201 aagaaaagtt caaatctccc tcctgtttac ctccttacgg tcactcaaga gtcccctgtg
     4261 acctctgatg ttgtatttgc ctctcagcca ccttggtcac atttctagaa ccctggattt
     4321 cctgggagaa tccagcaaat gaaagagctg ctaaacggtg acccggctgt gtatccggag
     4381 agctggtgct caccactcaa ggaaccagag tgatcgggag aaggctgacc tcgtgaccta
     4441 aagtgggtgt gaactctcac ccagaaaaag tagggcacct ttgaaaactg taatcgtcat
     4501 ttattgcatg aattggagta tcccccctgc aggtgagagg atgctgtccc acgaattagc
     4561 atccaacaac tgtaccgaaa tgtcactcct ctcatttgga agtactgaca actactcata
     4621 actagggttc tgaagaactg tatctgaggg tgtcaaacaa gcttgtaatt taaaatctac
     4681 accaacaaaa
//
