LOCUS       NM_001134710            1772 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus canopy FGF signaling regulator 3 (Cnpy3), mRNA.
ACCESSION   NM_001134710 XM_001062678 XM_001065691
VERSION     NM_001134710.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Konno K, Wakabayashi Y, Akashi-Takamura S, Ishii T, Kobayashi M,
            Takahashi K, Kusumoto Y, Saitoh S, Yoshizawa Y and Miyake K.
  TITLE     A molecule that is associated with Toll-like receptor 4 and
            regulates its cell surface expression
  JOURNAL   Biochem Biophys Res Commun 339 (4), 1076-1082 (2006)
   PUBMED   16338228
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JACYVU010000213.1.
            
            [WARNING] On Apr 1, 2024 this sequence was replaced by
            NM_001134710.3.
            
            On Nov 27, 2020 this sequence version replaced NM_001134710.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166762.1, SRR8487227.84514.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-170               JACYVU010000213.1  3584015-3584184
            171-294             JACYVU010000213.1  3587901-3588024
            295-391             JACYVU010000213.1  3592823-3592919
            392-514             JACYVU010000213.1  3596350-3596472
            515-632             JACYVU010000213.1  3596842-3596959
            633-1772            JACYVU010000213.1  3597237-3598376
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q12"
     gene            1..1772
                     /gene="Cnpy3"
                     /note="canopy FGF signaling regulator 3"
                     /db_xref="GeneID:685174"
                     /db_xref="RGD:1597709"
     exon            1..170
                     /gene="Cnpy3"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..853
                     /gene="Cnpy3"
                     /note="protein canopy homolog 3; canopy 3 homolog"
                     /codon_start=1
                     /product="protein canopy homolog 3 precursor"
                     /protein_id="NP_001128182.2"
                     /db_xref="GeneID:685174"
                     /db_xref="RGD:1597709"
                     /translation="MESMSELAPRCLLLLLLLLPLLLLPAPKLGPSSAGAEETDWVRL
                     PSKCEVCKYVAVELKSAFEETGKTKEVIDTGYGILDRKASGVKYTKSDLRLIEVTETI
                     CKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVAD
                     LKKQCDVLVEEFEEVIEDWYRNHQEEDLTQFLCANHVLKGKDTSCLAERWSGKKGDIA
                     SLGGKKSKKKRGRVKGSSGGGGSSKQRKELGSLEEDANPDEEGVQKASPLPHSPPDEL
                     "
     exon            171..294
                     /gene="Cnpy3"
                     /inference="alignment:Splign:2.1.0"
     exon            295..391
                     /gene="Cnpy3"
                     /inference="alignment:Splign:2.1.0"
     exon            392..514
                     /gene="Cnpy3"
                     /inference="alignment:Splign:2.1.0"
     exon            515..632
                     /gene="Cnpy3"
                     /inference="alignment:Splign:2.1.0"
     exon            633..1772
                     /gene="Cnpy3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgctccggg tccgactggg ccatggagtc catgtctgag ctcgcgcccc gctgcctcct
       61 gcttctcttg ctgctgctgc cgctgctgct cctccctgcc ccgaagctgg gcccgagctc
      121 cgccggggcc gaggagaccg actgggtgcg attgcccagc aaatgcgaag tgtgcaagta
      181 tgttgccgtg gagctgaagt cagcttttga ggaaacaggg aagaccaagg aagtgattga
      241 cacaggctac ggcattctgg accggaaggc ctctggagtc aagtacacca agtcggactt
      301 acggttaatt gaagtcactg agaccatatg caagaggctt ctggactaca gcctgcacaa
      361 ggagaggact ggcagcaacc ggtttgccaa gggtatgtcg gagacctttg agactctgca
      421 caacctagtc cacaaagggg ttaaggtggt gatggacatc ccctacgagc tgtggaatga
      481 gacctcagct gaagtggctg acctcaagaa gcagtgtgat gtgctggtgg aggaatttga
      541 agaggtgatc gaggactggt acaggaacca ccaggaggaa gacctcactc agttcctgtg
      601 tgccaaccat gtgctgaagg gcaaggacac cagttgcctg gcagagcggt ggtctggcaa
      661 gaagggggac atagcctccc tgggagggaa gaaatccaag aagaagcgcg gcagggtcaa
      721 gggttccagt ggcggtggcg gcagcagcaa gcagaggaag gaactgggga gcctggagga
      781 ggacgccaac ccagacgagg agggcgtgca gaaggcgtct ccccttccac acagcccccc
      841 tgacgagctg tgagcctagc ttagtgtcca tggatcaaga ccccagacga gagctgaagc
      901 gcttgggacg tggctccagc aaggacggct ctgtcccagt ttccggtctc ctcccttggc
      961 tgtgccctct ttcttccctt gaacaacaag aagtggaagg atctggggtg ctgggagtcc
     1021 ccagcccaaa gggaagagca ggaggcggct ctctttctat acagcccccg tcatgagtgg
     1081 gtcccaccca gcatccccag gctgcgactc ctgaccttga agctgacgag catgaggccc
     1141 acagggtgct cgcagtgcct ctcacccagg agggacagag cccgggaagc actcagtgca
     1201 gcctccgtag ccagacctgc ctcttcctcc accaagtatc ctctctgccc gtccttgtcg
     1261 ggtcttgtcg gtcgtgagtt tcagaacttt gaggatgaac tcaggaggtg tgcacaaggg
     1321 gccggacacc acagctgcag ccactccaga cctgcggaga ggacgcctca cctgacgcca
     1381 ccgggaagca aaaccacagc ccccatgtct acccaccctt cctgaggaca ctctctgccc
     1441 agccctcctc cccagggcta ccagagtaaa caccttttgg ccttttggtt tggttcttgg
     1501 gtcctcttca gcctccagag tgccccctcc catgtccctt ttctgcctat gtcccccaag
     1561 tcccaggtac tggaaaggct gtcactgtca ttggaggctt aacctgctag ttactaggag
     1621 gagcaggtac tgggagcacg gggggggggg ggggggttgg tttggagtca gtcactcaga
     1681 ggttctcagt cttctaacat tgcagcccct taatacagtt cctcatgttg tggtgacccc
     1741 catccccaac cataaaatta ttttcgttgc ta
//
