LOCUS       NM_001106901            4107 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus cyclin and CBS domain divalent metal cation
            transport mediator 3 (Cnnm3), mRNA.
ACCESSION   NM_001106901 XM_001056677 XM_237093
VERSION     NM_001106901.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4107)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Jun 9, 2011 this sequence version replaced NM_001106901.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.33420.1,
                                           SRR26643295.34935.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1272              JAXUCZ010000009.1  46251265-46252536
            1273-1416           JAXUCZ010000009.1  46258638-46258781
            1417-1566           JAXUCZ010000009.1  46259736-46259885
            1567-1736           JAXUCZ010000009.1  46260199-46260368
            1737-1833           JAXUCZ010000009.1  46260498-46260594
            1834-1967           JAXUCZ010000009.1  46260869-46261002
            1968-2106           JAXUCZ010000009.1  46261353-46261491
            2107-4107           JAXUCZ010000009.1  46264613-46266613
FEATURES             Location/Qualifiers
     source          1..4107
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q21"
     gene            1..4107
                     /gene="Cnnm3"
                     /note="cyclin and CBS domain divalent metal cation
                     transport mediator 3"
                     /db_xref="GeneID:301345"
                     /db_xref="RGD:1307926"
     exon            1..1272
                     /gene="Cnnm3"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..2171
                     /gene="Cnnm3"
                     /note="metal transporter CNNM3; cyclin M3"
                     /codon_start=1
                     /product="metal transporter CNNM3 precursor"
                     /protein_id="NP_001100371.2"
                     /db_xref="GeneID:301345"
                     /db_xref="RGD:1307926"
                     /translation="MAAAAAAVAGWLGWVLAAFCLGSTAGEAAPGAGLLSFCTEEDGA
                     PGAGSLRGRAAPEATLCLRLFCPGLANSSWTWVAPEGAGCPEGGRATEPSEAAAPTGE
                     WRALLRLRAEAGHPRSALLAVRVEPGGGAAEEAAAPWALGLGAAGLLALAAVARGLQL
                     SALALAPAEVQVLRESGSEAERAAARRLEPARRWAGCALGALLLLASLAQAALAVLLY
                     GAVGQRAVPAVLGCAGLVFLVGEVLPAAVSGRWALALAPRALGLSRLAVLLTLPVALP
                     VGQLLELAARPGRLRERVLELARGGGDPYSDLSKGVLRYRTVEDVLTPLEDCFMLDSG
                     TVLDFSVLASIMQSGHTRIPVFEEERSNIVDMLYLKDLAFVDPEDCTPLSTITRFYNH
                     PLHFVFNDTKLDAVLEEFKRGKSHLAIVQKVNNEGEGDPFYEVLGLVTLEDVIEEIIR
                     SEILDESEDYSDTKVKKKAVTLGAPLKRKEEFSLFKVSDDEYKVKISPQLLLATQRFL
                     SREVDVFSPLRISEKVLLHLLKHPSVNQEVKFDESNRLATHHYLYQRSQPVDYFILIL
                     QGRVEVEIGKEGLKFENGAFTYYGVSALTAPSSAHQSPVSSRQLIRHDLQPEPADSTR
                     SCTYCPDYTVRALSDLQLIKVTRLQYLNALLATRAQSLPPSPENAELQAIPGSQTRLL
                     GDKSRETAGPSSSRRSIPVEESPGRNPGV"
     exon            1273..1416
                     /gene="Cnnm3"
                     /inference="alignment:Splign:2.1.0"
     exon            1417..1566
                     /gene="Cnnm3"
                     /inference="alignment:Splign:2.1.0"
     exon            1567..1736
                     /gene="Cnnm3"
                     /inference="alignment:Splign:2.1.0"
     exon            1737..1833
                     /gene="Cnnm3"
                     /inference="alignment:Splign:2.1.0"
     exon            1834..1967
                     /gene="Cnnm3"
                     /inference="alignment:Splign:2.1.0"
     exon            1968..2106
                     /gene="Cnnm3"
                     /inference="alignment:Splign:2.1.0"
     exon            2107..4107
                     /gene="Cnnm3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggctgcgcc cgaggcccag aaggggtagc aggccatggc ggcggctgct gcggctgtgg
       61 cgggttggtt gggctgggtg cttgctgcgt tctgtctggg cagcaccgca ggggaggcgg
      121 cgccgggcgc gggactgctg agcttctgca cggaggagga cggtgctccg ggcgcgggct
      181 ccctacgcgg aagggcagcg ccggaggcca ctttgtgctt gcgactcttc tgcccaggct
      241 tggccaacag ttcctggacc tgggtagccc cggagggcgc aggctgcccc gagggcgggc
      301 gggccacgga gccctcggag gcggccgccc ccacgggcga gtggcgcgcg ctgctgcgcc
      361 tgcgcgccga ggccggccac ccgcgctccg cgctgctggc agtgcgcgtg gagccgggcg
      421 gcggggcagc tgaggaggcg gcggcgccct gggcgctggg gctgggggcg gccgggctgc
      481 tggctctggc ggctgtggct cgcggcctgc agctgagcgc gctggcgctg gcgccggccg
      541 aggtgcaggt gctgcgcgag agcggctcgg aggcggagcg cgcggctgcg cggcgcctgg
      601 aacccgcacg gcgctgggcc ggctgcgccc tgggcgcgct gctgcttctg gccagcctgg
      661 cacaggcggc actggcggtg ctgctgtacg gggcggtggg ccagcgcgcc gttcccgccg
      721 tgctgggctg cgcggggctg gtgttcctgg taggtgaggt gctgccggcc gccgtgagcg
      781 gacgctgggc tctggcgctg gcgccgcgcg cgctgggcct cagccgcctg gcggtgctac
      841 tcaccttgcc ggtggcgctg cccgtcgggc agctgctgga gctggcagcg cggcccgggc
      901 gtctgcggga gcgcgtgcta gagctggcgc gcggcggtgg cgacccctac agcgacctca
      961 gcaagggagt gctgcgctac cggaccgtgg aggacgtgct cacgccgctc gaagactgct
     1021 ttatgctgga ctccggcact gtcctggact tcagcgtcct cgcaagcatc atgcagagcg
     1081 gccacacgcg catcccagtg tttgaggagg agcgctccaa catcgtggac atgctgtacc
     1141 tcaaagacct ggccttcgtg gaccccgagg actgcacgcc gctcagcacc atcacccgat
     1201 tctacaacca tccactccac tttgtcttca acgacaccaa actggacgcc gtcctggagg
     1261 agttcaagag aggcaagtcc cacctggcca tcgttcagaa ggtgaacaat gagggcgagg
     1321 gcgatccctt ctatgaggtg ctgggcctgg tcaccctgga ggacgtcatc gaggagatca
     1381 tcaggtctga gatcctggat gagtctgaag actactcaga cacaaaggtg aagaagaagg
     1441 ccgtcaccct gggcgcccct ctcaagcgga aggaggaatt ctccttattc aaggtgtctg
     1501 atgatgaata taaagtaaaa atctcgcctc agctgctcct ggccacccag cgcttccttt
     1561 cccgagaggt ggatgtgttc agcccattgc gaatctctga gaaagtcttg ctgcacctgc
     1621 tgaagcatcc cagtgtcaac caggaggtga agtttgacga gagcaaccgc ttggccacac
     1681 accattattt gtaccagcgc agccagccag tagattactt cattctcatc ctgcagggca
     1741 gggtcgaggt ggaaatcggg aaagagggcc tgaagttcga gaacggggcc ttcacatact
     1801 atggcgtgtc cgccctgaca gctccatctt cagctcatca gtccccagtg tcttcacgcc
     1861 agctcatccg ccatgacttg cagcctgaac cagcggacag tacccgctcc tgcacgtact
     1921 gtcctgacta cactgtgagg gccctttctg acctgcagct cattaaggtc acacggctgc
     1981 agtaccttaa tgcactcctg gctacccgag cccagagctt acctccatct ccagagaacg
     2041 ctgagctcca ggccatcccg ggcagccaga ccaggctcct tggtgacaaa tccagagaga
     2101 cagcagggcc cagcagcagc agacgcagca tcccagtgga ggagagccct gggcggaacc
     2161 caggagtgta actgcttgcc actcagcccc gagctgggaa tggacaagct cgtggggagc
     2221 tgggacagcc aagcaggagc ttcataccag cccatcccca cctatcctgg ccacgtttta
     2281 gatggccctt agaagctgtg ggtcctgggc ctcctcagtg ccagagcctc cagcccctct
     2341 gttgtccttg aggagatggg attaacagag caaccctcca gaagcctgtt tctgagggga
     2401 caaaagaaac agcatcatct ctagtcccga agacccagtg ctgtaacagc acagtgtgtg
     2461 tgtctccctg agcccagtgc cttcacatgg cctgggcctg tgctcatttt gcttttgatt
     2521 agcctgtcac tggcactact ctgagcaaac caggagtgct ggctttagat gaaagtgttc
     2581 aaatccatgg ccctgccatg tactttttgg cttctcttac aatgctgtat tttgattcat
     2641 gaaccccagt tttttctgtg tgccaaatct aagagcagag ctccccaata agttggtgcc
     2701 ccggttctgc tccctcctgt ggaggaagct cctctgactc ataagcaggc tggcccaggg
     2761 tcagcttgca tttcctcccc acttggggaa gccataacgg tattgtcggt ttctgtttga
     2821 ggtcgtgtgg aaggctaaag gcggatgctg accgcctgtt gtacctgtct tgtgcttttg
     2881 ccctgagcat ccaggaagat gtacagctgt aatgtcggga gcatcagtca gttagggtcg
     2941 gttgtgagcc tgctacgtcc tcgtcgcttg ctaagaagtc aaggttttct tgtatctcag
     3001 aaatattcaa atcctttgca cttttctgtt tccagtgatg ttttagagac acaggaatgg
     3061 gaagacattg tctttttatt ttagtttacc tgtactttct ttccacagtt tcggctctgg
     3121 gaccatagat tggggtggga aggaaggatt tctggaacct tccttaaaag aatgcaggcc
     3181 cttgtgagac tcggaggccc gagaaaaata aattctaatg gaatatgctc taagaacaaa
     3241 cccaggtcag acacaaataa aattttcctg tctccaaaac agaattctaa attttggctg
     3301 aacctcagaa tcaaattaga accttggtta cctgtgctca ccttgaaccg gcagagctgt
     3361 ggtcttgaag tagttttaac ttcctcctag aagagttccc tatgcctttt gccagcttct
     3421 cctgatgtta acatgttaat taaccttgtt acatatatca aaactaaagt gttaacactg
     3481 gagtactctt aactgtggcc ttcatttaga ttttactttt tctttgattt ctggtaactg
     3541 ggttccaggg taggatgcca ggatgcactt ggagccattg tttcttttgc tctgactttg
     3601 tcttctacag taattgcaga ttcataggat atggcaaaga cacagagccc acgcaccttc
     3661 atctggcttc ccccagtgtt cccatctcat aaactatgta gtgggcagaa ctatggagtt
     3721 ctgcatcccc gccacctctg tgtagacctg agttctgcta ccttggaaga ctaacccact
     3781 gtcctggcac taccagggta ccccctggac cgccctcaga gccacctgcc ctggccctaa
     3841 gccccgggac cactagactt tcctcagctc tgtcactttg tcacttcaag aatgtcataa
     3901 ggggccgagc ggtgtgcatc ctttgggatt gactcctcca ttcatcgtag tgctctggag
     3961 actgttccag gtcagtgtgt catggcgtgt tcctccccct tgccaaatgg tgtcccatgg
     4021 tgtattcatt gtcctgtcag aggacatctg ggttgtttcc agttcttggc cttttcaaaa
     4081 taaagctgct atgaacattc acgtaca
//
