LOCUS       NM_001106173            1131 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus CTD nuclear envelope phosphatase 1 regulatory
            subunit 1 (Cnep1r1), mRNA.
ACCESSION   NM_001106173 XM_001063368 XM_214651
VERSION     NM_001106173.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Han,S., Bahmanyar,S., Zhang,P., Grishin,N., Oegema,K., Crooke,R.,
            Graham,M., Reue,K., Dixon,J.E. and Goodman,J.M.
  TITLE     Nuclear envelope phosphatase 1-regulatory subunit 1 (formerly
            TMEM188) is the metazoan Spo7p ortholog and functions in the lipin
            activation pathway
  JOURNAL   J Biol Chem 287 (5), 3123-3137 (2012)
   PUBMED   22134922
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474037.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001063368.1, XM_214651.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB583215.1, CV116587.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676789 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19p11"
     gene            1..1131
                     /gene="Cnep1r1"
                     /gene_synonym="RGD1308816; Tmem188"
                     /note="CTD nuclear envelope phosphatase 1 regulatory
                     subunit 1"
                     /db_xref="GeneID:291914"
                     /db_xref="RGD:1308816"
     exon            1..123
                     /gene="Cnep1r1"
                     /gene_synonym="RGD1308816; Tmem188"
                     /inference="alignment:Splign:2.1.0"
     CDS             99..476
                     /gene="Cnep1r1"
                     /gene_synonym="RGD1308816; Tmem188"
                     /note="transmembrane protein 188"
                     /codon_start=1
                     /product="nuclear envelope phosphatase-regulatory subunit
                     1"
                     /protein_id="NP_001099643.1"
                     /db_xref="GeneID:291914"
                     /db_xref="RGD:1308816"
                     /translation="MNSLEQAEDLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTAT
                     GAWNWLIDPETQKVSFLTSLWNHPFFTISCITLIGLFFAGIHKRVVAPSIIAARCRTV
                     LAEYNMSCDDTGKLILKPRPHVQ"
     exon            124..195
                     /gene="Cnep1r1"
                     /gene_synonym="RGD1308816; Tmem188"
                     /inference="alignment:Splign:2.1.0"
     exon            196..269
                     /gene="Cnep1r1"
                     /gene_synonym="RGD1308816; Tmem188"
                     /inference="alignment:Splign:2.1.0"
     exon            270..379
                     /gene="Cnep1r1"
                     /gene_synonym="RGD1308816; Tmem188"
                     /inference="alignment:Splign:2.1.0"
     exon            380..434
                     /gene="Cnep1r1"
                     /gene_synonym="RGD1308816; Tmem188"
                     /inference="alignment:Splign:2.1.0"
     exon            435..1131
                     /gene="Cnep1r1"
                     /gene_synonym="RGD1308816; Tmem188"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagcggtta gaggtgggag ttggcgctgc ccgcggggct gggagagagg gctgcgatgc
       61 ggacctggcc gcggcagtga ccggagctgc cggccgacat gaattcgctg gaacaggcgg
      121 aagatctcaa ggctttcgaa agaagactta ctgaatatat tcattgcttg caacctgcca
      181 ctggacgttg gagaatgctg cttatagtgg tgtctgtctg tacagctact ggtgcctgga
      241 actggctaat agaccctgag acacaaaagg tgtccttcct cacgtcactg tggaaccatc
      301 cgttcttcac gattagctgt ataacgctga taggcttgtt ctttgctgga atacacaaaa
      361 gagtagtcgc accatcaatt atagctgctc gatgtcgaac ggtattagca gaatacaata
      421 tgtcttgtga tgacacagga aagctaattt tgaaacctag acctcatgtt caatgacagt
      481 ctgcactatt gtaagggaac ctaaaccagt ctttcctcaa gtaagtgata ccgcagaata
      541 ccataaagga tttcttttag agttggacat gtgacggttt agcagcaact gacaagaagc
      601 gtgcaatact tgcccagatg atcttgacga tgctggccga gctcttggcg cctcagtacc
      661 tttgattacc tgtgttcagt attagtgtca cttcagcact tcagcccctg cacagaactc
      721 tgcagatgaa gtttgtgtgt attactaagt taaacttaga atccagacct ccttcagttt
      781 ttataatgta tttttgcaaa ttactgtaaa tagcaaatca atgccaatgt taaaccaaga
      841 ggaaaatgtt tggactttgt tctcctgcac cagtatttca ggaaccatct gcttgacatc
      901 cccacagctc cttaaactga ctgctacggg tgcctttcat tcttaatgcc tctttccatt
      961 gcgctgcagg aaaaacatcc gattttactt agaatccctg agccaatctc atcttcatta
     1021 tgttgaaaaa tttatagatg tttcgacaat ttttgttagg tccgatactg gattctggga
     1081 actattatat ttttcagtaa attgttttga tttaacacta aattactttt t
//
