LOCUS       NM_022598               1640 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Rattus norvegicus CCHC-type zinc finger, nucleic acid binding
            protein (Cnbp), mRNA.
ACCESSION   NM_022598
VERSION     NM_022598.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Chen,S., Su,L., Qiu,J., Xiao,N., Lin,J., Tan,J.H., Ou,T.M.,
            Gu,L.Q., Huang,Z.S. and Li,D.
  TITLE     Mechanistic studies for the role of cellular nucleic-acid-binding
            protein (CNBP) in regulation of c-myc transcription
  JOURNAL   Biochim Biophys Acta 1830 (10), 4769-4777 (2013)
   PUBMED   23774591
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (bases 1 to 1640)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 1640)
  AUTHORS   Massa,R., Panico,M.B., Caldarola,S., Fusco,F.R., Sabatelli,P.,
            Terracciano,C., Botta,A., Novelli,G., Bernardi,G. and Loreni,F.
  TITLE     The myotonic dystrophy type 2 (DM2) gene product zinc finger
            protein 9 (ZNF9) is associated with sarcomeres and normally
            localized in DM2 patients' muscles
  JOURNAL   Neuropathol Appl Neurobiol 36 (4), 275-284 (2010)
   PUBMED   20102514
  REMARK    GeneRIF: findings showed that ZNF9 is ubiquitously expressed in
            mammalian tissues, and that its signal is not substantially
            modified in myotonic dystrophy type 2 muscles
REFERENCE   5  (bases 1 to 1640)
  AUTHORS   Chen,W., Wang,Y., Abe,Y., Cheney,L., Udd,B. and Li,Y.P.
  TITLE     Haploinsuffciency for Znf9 in Znf9+/- mice is associated with
            multiorgan abnormalities resembling myotonic dystrophy
  JOURNAL   J Mol Biol 368 (1), 8-17 (2007)
   PUBMED   17335846
  REMARK    GeneRIF: Znf9 haploinsufficiency contributes to the myotonic
            dystrophy phenotype in Znf9+/- mice.
REFERENCE   6  (bases 1 to 1640)
  AUTHORS   Tsuji,A.B., Sugyo,A., Ogiu,T., Sagara,M., Kimura,T., Ishikawa,A.,
            Sudo,H., Ohtsuki,M., Aburatani,H., Imai,T. and Harada,Y.N.
  TITLE     Fine mapping of radiation susceptibility and gene expression
            analysis of LEC congenic rat lines
  JOURNAL   Genomics 86 (3), 271-279 (2005)
   PUBMED   15978772
REFERENCE   7  (bases 1 to 1640)
  AUTHORS   Shimizu,K., Chen,W., Ashique,A.M., Moroi,R. and Li,Y.P.
  TITLE     Molecular cloning, developmental expression, promoter analysis and
            functional characterization of the mouse CNBP gene
  JOURNAL   Gene 307, 51-62 (2003)
   PUBMED   12706888
REFERENCE   8  (bases 1 to 1640)
  AUTHORS   Yasuda,J., Mashiyama,S., Makino,R., Ohyama,S., Sekiya,T. and
            Hayashi,K.
  TITLE     Cloning and characterization of rat cellular nucleic acid binding
            protein (CNBP) cDNA
  JOURNAL   DNA Res 2 (1), 45-49 (1995)
   PUBMED   7788528
REFERENCE   9  (bases 1 to 1640)
  AUTHORS   Warden,C.H., Krisans,S.K., Purcell-Huynh,D., Leete,L.M.,
            Daluiski,A., Diep,A., Taylor,B.A. and Lusis,A.J.
  TITLE     Mouse cellular nucleic acid binding proteins: a highly conserved
            family identified by genetic mapping and sequencing
  JOURNAL   Genomics 24 (1), 14-19 (1994)
   PUBMED   7896269
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from D45254.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: D45254.1, BC062225.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     gene            1..1640
                     /gene="Cnbp"
                     /gene_synonym="Cnbp1; Znf9"
                     /note="CCHC-type zinc finger, nucleic acid binding
                     protein"
                     /db_xref="GeneID:64530"
                     /db_xref="RGD:621807"
     exon            1..151
                     /gene="Cnbp"
                     /gene_synonym="Cnbp1; Znf9"
                     /inference="alignment:Splign:2.1.0"
     exon            152..289
                     /gene="Cnbp"
                     /gene_synonym="Cnbp1; Znf9"
                     /inference="alignment:Splign:2.1.0"
     CDS             166..699
                     /gene="Cnbp"
                     /gene_synonym="Cnbp1; Znf9"
                     /note="zinc finger protein 9 (a cellular retroviral
                     nucleic acid binding protein); cellular nucleic
                     acid-binding protein; cellular nucleic acid binding
                     protein 1"
                     /codon_start=1
                     /product="CCHC-type zinc finger nucleic acid binding
                     protein"
                     /protein_id="NP_072120.1"
                     /db_xref="GeneID:64530"
                     /db_xref="RGD:621807"
                     /translation="MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQ
                     FVSSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCG
                     KPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYR
                     CGESGHLARECTIEATA"
     exon            290..382
                     /gene="Cnbp"
                     /gene_synonym="Cnbp1; Znf9"
                     /inference="alignment:Splign:2.1.0"
     exon            383..581
                     /gene="Cnbp"
                     /gene_synonym="Cnbp1; Znf9"
                     /inference="alignment:Splign:2.1.0"
     exon            582..1640
                     /gene="Cnbp"
                     /gene_synonym="Cnbp1; Znf9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagccgtgc gcagcggcgt gtgtggggcc gtgtgcagac ccgcgtgtgg cgcaggcaag
       61 gaccctgaaa ataaacagcc gctgctttgc gagtctcctt cttgggtcta cgtccgagtc
      121 tcctctgctg tgggcagctc agacgccgaa gctctaactg cagctatgag cagcaacgaa
      181 tgcttcaagt gtggacgatc tggccactgg gccagggaat gccctactgg tggaggtcgg
      241 ggtcgtggaa tgagaagccg cggcagaggt ggttttacct cggatagagg gttccagttt
      301 gtttcctcgt ctcttcctga catctgttat cgctgtggtg agtctggtca tcttgccaag
      361 gattgtgatc ttcaggagga tgcctgctat aactgcggta gaggtggcca cattgccaag
      421 gactgcaagg agcccaagag agagcgagag caatgctgct acaactgtgg caagccaggc
      481 catctggctc gtgactgtga ccacgcggac gagcagaagt gctattcctg tggggaattt
      541 ggacatattc aaaaagactg caccaaggtg aagtgctata ggtgtggtga aactggtcat
      601 gtagccatca attgcagcaa gacaagtgaa gtcaactgtt accgctgtgg cgagtcaggg
      661 catcttgcac gggaatgcac aattgaggct actgcctaat tattttcctt tgtcgcccct
      721 cctttttctg attgatggtt gtattatttt ctctgaatcc tcttcactgg ccaaaggttg
      781 gcagatagag gctgttccca ggccagtgag ctttacttgc agtgtaaaag gaggaaaggg
      841 gtggaaaaaa aaccgaattt ctgcatttaa ctacaaaaaa agtttatgtt tagtttggta
      901 gaggtgttat gtataatgct ttgttaaaga accccctttc cgtgccactg gtgaataggg
      961 attaatgaat gggaagagtt cagtcagacc agtaagccct tctgggtttg agtgtgttcc
     1021 catgtaggag gtaaaaccaa ttctggatgc atctaagctt ccatgaataa ctttaattct
     1081 tagcataatg atggccttgg attgtctgac ctcagtagct attaaataac atcgagtaac
     1141 atctgcatca ggccctcata gaacattcag ttgagttggg agtaaactga aaagacaaat
     1201 gtgttgaagg atatgccagg gaatctggct aaagcctaat acaggagcat cttcatccca
     1261 gtgttgatgc tggacgtaca gaaggtgatg gcaaaggtgt agaacacatt ttttcaaaga
     1321 ctaaatctaa aacccagagt aaacatccga tgctcagagt tagcataatt tggagctatt
     1381 caggaattgc agagaaatgc attttcacag aaatcaagat gttatttttg tatactatat
     1441 cacttagaca actgtgtttc atttgctgta atcagttttt aaagtcagat ggaaaaagca
     1501 actgaagtct tagaaaatag aaaatgtaat tttaaactat tccaataaag ctggaggagg
     1561 aaggggagtt ttgactaaag ttccttttgt ttgttttaaa ttttcatcaa tgtatataga
     1621 acaaaatgcc atattaaaga
//
