LOCUS       NM_001304368            2266 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus cyclic nucleotide binding domain containing 2
            (Cnbd2), mRNA.
ACCESSION   NM_001304368 XM_008762318
VERSION     NM_001304368.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Krahling,A.M., Alvarez,L., Debowski,K., Van,Q., Gunkel,M.,
            Irsen,S., Al-Amoudi,A., Strunker,T., Kremmer,E., Krause,E.,
            Voigt,I., Wortge,S., Waisman,A., Weyand,I., Seifert,R., Kaupp,U.B.
            and Wachten,D.
  TITLE     CRIS-a novel cAMP-binding protein controlling spermiogenesis and
            the development of flagellar bending
  JOURNAL   PLoS Genet 9 (12), e1003960 (2013)
   PUBMED   24339785
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Jan 21, 2015 this sequence version replaced XM_008762318.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.896250.1,
                                           SRR26360172.1961535.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-427               JAXUCZ010000003.1  165279303-165279729
            428-481             JAXUCZ010000003.1  165285502-165285555
            482-538             JAXUCZ010000003.1  165291146-165291202
            539-676             JAXUCZ010000003.1  165299995-165300132
            677-730             JAXUCZ010000003.1  165304235-165304288
            731-894             JAXUCZ010000003.1  165305628-165305791
            895-1051            JAXUCZ010000003.1  165308579-165308735
            1052-1203           JAXUCZ010000003.1  165309148-165309299
            1204-1342           JAXUCZ010000003.1  165311423-165311561
            1343-1457           JAXUCZ010000003.1  165323555-165323669
            1458-1635           JAXUCZ010000003.1  165333119-165333296
            1636-1756           JAXUCZ010000003.1  165335444-165335564
            1757-1920           JAXUCZ010000003.1  165340664-165340827
            1921-2266           JAXUCZ010000003.1  165344582-165344927
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..2266
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /note="cyclic nucleotide binding domain containing 2"
                     /db_xref="GeneID:296311"
                     /db_xref="RGD:1311678"
     exon            1..427
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     CDS             101..2239
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /note="cyclic nucleotide (cNMP) binding domain containing
                     1"
                     /codon_start=1
                     /product="cyclic nucleotide-binding domain-containing
                     protein 2"
                     /protein_id="NP_001291297.1"
                     /db_xref="GeneID:296311"
                     /db_xref="RGD:1311678"
                     /translation="MEGSKNPETASPTSHVKSERGKSFGESIDTSFSGSNDGNPEELL
                     LEETSLPQTEEMEAEKTESKSESESDFGLEEGEKEGEKEGEKERPSMEDKLEAETPQP
                     KDRPGLQIGKLLPPKVQSWKALKSIIKVSVTPKTHSWADIRKERGLYQLTVAIILMSR
                     VCKMFRQGLRGFREYQIIEPAQKKHPTFSFWDKKKQGRISFDTQDFAAEEGHFPPRAI
                     SITQKKPSWRTDEEIQDLCNILQVLDCYRNYTEYLQLLLAKVMRFERFGRRRVIVKKG
                     QRGNSFYFIYLGTVAVTEDEDGSSAFLDPHPTLLHKGGFFGEMGLLSTAVRRATVVCM
                     EETEFLVVDREDFLANKLGDEVQKETQYRYDFFRKLDMFQSWSDEKLWQLVALGRIEK
                     FPHGELVSKDIGNSAFITFICKGNCEILRMVDLGTCRTYYRWVWQQLELLDHKPLRVH
                     NNEMSPKERFKEFQIKSYPLQDFTYLKLLRLQEAREQPAMTFHRKINKAENSLPKLLG
                     PKVKSRYGHSVKCSMVHTKYGELPKEAIVGVYMKVHLTEEGDVVGNHQAFLPEIHRDP
                     RSFILLSLGTELIRVRKEKFYDLVDAETKAKIMKMDVDYPSDEELCQSFLSENDWSIF
                     RRDLLRLLVEPLKKKPFIPIQTKKKEIYNPKSLLLDLCSLDKKVRQRYPVFMAPRKYL
                     PPLKIVQTISAPRHKVQELLPQYKNAGVLI"
     exon            428..481
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            482..538
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            539..676
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            677..730
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            731..894
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            895..1051
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            1052..1203
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            1204..1342
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            1343..1457
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            1458..1635
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            1636..1756
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            1757..1920
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
     exon            1921..2266
                     /gene="Cnbd2"
                     /gene_synonym="Cnmpd1; LRRGT00127"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctgaagggc agaacccgcg cacctcggcg ggacgcggac ttaggacaga ccgcgggtga
       61 gccgagctta cctctaacag cgaagctcct caggccggaa atggagggct ccaagaatcc
      121 ggaaaccgcg tcccctacaa gtcacgtgaa gtctgagcgg gggaagtcct ttggggagtc
      181 catagatacc agcttttcag gcagtaatga tggcaaccct gaagagctcc tattggagga
      241 gacatcgttg ccgcagactg aggagatgga agcggagaag acggagtcga aatccgagtc
      301 ggaatcggat ttcggattgg aggagggaga gaaggaggga gagaaggagg gagagaagga
      361 gagaccatcc atggaggata agctagaggc ggagactccc caaccgaagg accgccctgg
      421 cttgcagatt ggaaagttgc tccccccaaa ggtgcaaagt tggaaggctc tcaaatccat
      481 cattaaggtg tcagtgacac cgaagacaca tagctgggca gacattagaa aagaaagagg
      541 actgtaccag ctcactgtgg ccatcatctt gatgagtcgg gtgtgtaaga tgttccgtca
      601 aggcctcagg ggattccggg aatatcagat cattgagcct gctcaaaaga agcatcctac
      661 cttctccttc tgggataaaa agaagcaagg ccgcatctcg tttgacaccc aggactttgc
      721 cgcagaggag ggtcacttcc ctccgagggc catttctatc acacagaaga agccatcctg
      781 gaggacagac gaggaaatcc aagacctctg caatatcctt caggttctag attgctaccg
      841 caactacaca gagtatctgc agctgctcct ggccaaggtc atgcgcttcg aaaggtttgg
      901 tcgccggcgt gtaatcgtca agaaggggca gaggggcaat agcttttatt tcatctacct
      961 gggcacggtg gccgtgaccg aggacgaaga tgggagcagt gcttttctgg accctcaccc
     1021 aacactgctg cacaagggtg gcttcttcgg ggaaatgggc cttctgagca cggcagtaag
     1081 aagggccacg gtggtctgca tggaggagac agagttcctg gtggtcgaca gagaggattt
     1141 ccttgcaaac aagctaggtg acgaggttca gaaggaaact cagtatcgat acgacttttt
     1201 taggaagctg gatatgttcc agtcttggtc tgatgagaag ctctggcagc tcgtggcctt
     1261 ggggaggata gagaagttcc cacatggaga gctggtgtct aaagacattg ggaattcagc
     1321 atttatcaca tttatctgca agggcaactg tgaaatcctg cgaatggtag acctggggac
     1381 ctgccgtacc tattacaggt gggtctggca gcaactggag ctgttggacc acaagcctct
     1441 gagagttcat aacaatgaaa tgtctccaaa ggagagattt aaggaattcc agatcaaatc
     1501 atatcctcta caagacttca cttacttaaa acttctgcgt ctccaggaag ccagagagca
     1561 acccgcaatg accttccaca ggaagatcaa caaagcagaa aacagcctcc ccaagttgct
     1621 gggcccgaaa gtcaaatcca ggtatggtca ttcagtcaaa tgttccatgg tccacaccaa
     1681 gtatggtgaa ctccccaagg aggccatagt gggggtctac atgaaggttc acttgacaga
     1741 ggaaggagat gtggtgggca atcaccaggc ctttctccca gaaatccatc gtgatcctcg
     1801 gtccttcatc cttctgagct tgggaacaga gttgattcga gtaagaaaag agaaatttta
     1861 tgacttggtc gatgcggaga caaaggcaaa gataatgaag atggacgtgg actatcccag
     1921 cgatgaagaa ctgtgtcaga gtttcctgag tgaaaatgac tggagtatct ttcggaggga
     1981 tctgctgcgg ttgctggtgg agcccctcaa aaagaagcca ttcatcccga tccagaccaa
     2041 gaagaaagag atctacaacc ctaagtcttt gttactggat ctgtgtagcc ttgacaagaa
     2101 ggtgagacag cgctatcctg tttttatggc gccccggaaa tacctgcctc ccttgaagat
     2161 tgtccaaacc atctcagcac cccggcacaa agtccaagaa ctcttacctc agtataaaaa
     2221 cgcaggggtc cttatttaga gggaataaag cacatttgga ttggca
//
