LOCUS       NM_001106034            1045 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus CKLF-like MARVEL transmembrane domain containing
            5 (Cmtm5), mRNA.
ACCESSION   NM_001106034 XM_001056147 XM_214187
VERSION     NM_001106034.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ge,Y., Waldemer,R.J., Nalluri,R., Nuzzi,P.D. and Chen,J.
  TITLE     RNAi screen reveals potentially novel roles of cytokines in
            myoblast differentiation
  JOURNAL   PLoS One 8 (7), e68068 (2013)
   PUBMED   23844157
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FM029909.1, CX569344.1 and AI715540.1.
            
            On Aug 4, 2012 this sequence version replaced NM_001106034.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV721540.1, DV722340.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760384, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-606               FM029909.1         1-606
            607-1027            CX569344.1         123-543
            1028-1045           AI715540.1         1-18                c
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p13"
     gene            1..1045
                     /gene="Cmtm5"
                     /gene_synonym="Cklfsf5"
                     /note="CKLF-like MARVEL transmembrane domain containing 5"
                     /db_xref="GeneID:290214"
                     /db_xref="RGD:1307045"
     exon            1..462
                     /gene="Cmtm5"
                     /gene_synonym="Cklfsf5"
                     /inference="alignment:Splign:2.1.0"
     CDS             337..807
                     /gene="Cmtm5"
                     /gene_synonym="Cklfsf5"
                     /note="chemokine-like factor super family 5"
                     /codon_start=1
                     /product="CKLF-like MARVEL transmembrane domain-containing
                     protein 5"
                     /protein_id="NP_001099504.2"
                     /db_xref="GeneID:290214"
                     /db_xref="RGD:1307045"
                     /translation="MFSVWDRQERPPEEGTAAGLQGFGVDKTFLSSLKGILLETELAL
                     TFIIFICFTASISAYMAAALLEFFITLAFLFLYATQCYQRFDRLNWPCLDFLRCLSAI
                     IIFLVVSFAAVTSREGAAIAAFVFGIILVSVFAYDAFKIYRTELMPRTTEGDQQ"
     exon            463..615
                     /gene="Cmtm5"
                     /gene_synonym="Cklfsf5"
                     /inference="alignment:Splign:2.1.0"
     exon            616..708
                     /gene="Cmtm5"
                     /gene_synonym="Cklfsf5"
                     /inference="alignment:Splign:2.1.0"
     exon            709..793
                     /gene="Cmtm5"
                     /gene_synonym="Cklfsf5"
                     /inference="alignment:Splign:2.1.0"
     exon            794..1029
                     /gene="Cmtm5"
                     /gene_synonym="Cklfsf5"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1010..1015
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cmtm5"
                     /gene_synonym="Cklfsf5"
     polyA_site      1029
                     /gene="Cmtm5"
                     /gene_synonym="Cklfsf5"
ORIGIN      
        1 atcccccaac tcctcaggtt tctttcccat gtcttccctc catgttcctt ctttccttct
       61 tcagggtggg ttaggccaga ggaagaggag ggttaaccac ctctctctct ctcaccctcc
      121 ccatgcttcc taggggccct gcaggccagt ctgggcagct gggtgaagct catctgggca
      181 aacttgccct ggggactgcc tttccccaga gtcctacagc agaccccagc ttcactttca
      241 ggcccctgtc tgcttctcta accacatttc tgtttccctt cctgggctgc tgggaatctg
      301 gtgagggaga gtccgtgtcc cgtgagcctc acagagatgt tcagtgtttg ggatcgtcag
      361 gagcggcccc cagaggaagg aacagctgca ggactccagg gcttcggagt ggacaagacc
      421 ttcctgtctt ccctcaaagg catcctgctg gaaactgagc tggccctgac cttcataatc
      481 ttcatttgct tcacggcctc catctctgcc tacatggctg cagcgttgct agagttcttc
      541 atcacactgg ccttcctctt cctctacgcc acccagtgct accagcgctt cgacaggctt
      601 aactggcctt gtctggactt cctccggtgt ctcagcgcca tcatcatctt cctggtggtc
      661 tcctttgcag ctgtgacctc gagggaggga gctgccattg ctgcttttgt ttttggcatc
      721 atcctggtct ctgtttttgc ctatgatgcg ttcaagatct accgaactga gttgatgccc
      781 aggaccacag agggggacca gcagtgattc caggactacc tcgctcccac gaccagacac
      841 aaggaaccat agagcccatc tgtgtcgtct ttgaattcac tgaaccccga gtgcccacca
      901 tctactccac gtcttcagag atgtgcgctt gagaaatgcc agggacctgt gggaagtggt
      961 gaagttctgg gggtcggggc aggttgccat gcctccaagt cactcccaaa ttaaaaaaaa
     1021 aaaatcctaa aaaaaaaaaa aaaaa
//
