LOCUS       NM_001163273            2498 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus c-Maf-inducing protein (Cmip), mRNA.
ACCESSION   NM_001163273 XM_001078448 XM_214698
VERSION     NM_001163273.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Yu,L., Ye,J., Liu,Q., Feng,J., Gu,X., Sun,Q. and Lu,G.
  TITLE     c-Maf inducing protein inhibits cofilin-1 activity and alters
            podocyte cytoskeleton organization
  JOURNAL   Mol Med Rep 16 (4), 4955-4963 (2017)
   PUBMED   28791377
  REMARK    GeneRIF: CMIP inhibits cofilin1 activity and alters podocyte
            cytoskeleton organization at least through RhoA signaling in
            PAinduced podocyte injury
REFERENCE   2  (bases 1 to 2498)
  AUTHORS   Wilson,R., Geyer,S.H., Reissig,L., Rose,J., Szumska,D., Hardman,E.,
            Prin,F., McGuire,C., Ramirez-Solis,R., White,J., Galli,A.,
            Tudor,C., Tuck,E., Mazzeo,C.I., Smith,J.C., Robertson,E.,
            Adams,D.J., Mohun,T. and Weninger,W.J.
  TITLE     Highly variable penetrance of abnormal phenotypes in embryonic
            lethal knockout mice
  JOURNAL   Wellcome Open Res 1, 1 (2017)
   PUBMED   27996060
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On or before Jul 17, 2009 this sequence version replaced
            XM_214698.4, XM_001078448.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643292.61698.1,
                                           SRR26643295.58237.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-300               JAXUCZ010000019.1  62213402-62213701
            301-426             JAXUCZ010000019.1  62337666-62337791
            427-477             JAXUCZ010000019.1  62344682-62344732
            478-639             JAXUCZ010000019.1  62369376-62369537
            640-681             JAXUCZ010000019.1  62374523-62374564
            682-744             JAXUCZ010000019.1  62381631-62381693
            745-825             JAXUCZ010000019.1  62385701-62385781
            826-929             JAXUCZ010000019.1  62388657-62388760
            930-1034            JAXUCZ010000019.1  62390222-62390326
            1035-1388           JAXUCZ010000019.1  62395561-62395914
            1389-1454           JAXUCZ010000019.1  62402964-62403029
            1455-1481           JAXUCZ010000019.1  62404713-62404739
            1482-1530           JAXUCZ010000019.1  62405035-62405083
            1531-1638           JAXUCZ010000019.1  62406961-62407068
            1639-1755           JAXUCZ010000019.1  62410221-62410337
            1756-1896           JAXUCZ010000019.1  62411113-62411253
            1897-1944           JAXUCZ010000019.1  62411819-62411866
            1945-2091           JAXUCZ010000019.1  62412968-62413114
            2092-2197           JAXUCZ010000019.1  62413673-62413778
            2198-2268           JAXUCZ010000019.1  62414845-62414915
            2269-2498           JAXUCZ010000019.1  62417271-62417500
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..2498
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /note="c-Maf-inducing protein"
                     /db_xref="GeneID:292051"
                     /db_xref="RGD:1306101"
     CDS             1..2322
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /codon_start=1
                     /product="C-Maf-inducing protein"
                     /protein_id="NP_001156745.1"
                     /db_xref="GeneID:292051"
                     /db_xref="RGD:1306101"
                     /translation="MDVTSSSGGGDPRQIEETKPLLGSDVSAPEGTKVMGAVPCRRAL
                     LLCNGMRYKLLQEGDIQVCVIRHPRTFLSKILTSKFLRRWEPHHLTLADNSLASATPS
                     GYMENSVSYSAIEDVQPLSWENAPKYCLQLTIPGGTVLLQAANSYLRDQWFHSLQWKK
                     KIYKYKKVLSNPSRWEVVLKEIRTLVDMALTSPLQDDSINQAPLEIVSKLLSENTNLT
                     TQEHENIIVAIAPLLENNHPPPDLCEFFCKHCRERPRSMVVIEVFTPVVQRILKHNMD
                     FGKCPRLRLFTQEYILALNELNAGMEVVKKFIQSMHGPTGHCPHPRVLPNLVAVCLAA
                     IYSCYEEFINSRDNSPSLKEIRNGCQQPCDRKPTLPLRLLHPSPDLVSQEATLSEPRL
                     KSVVVASSEVHVEVERTSTAKPALTASTGNDSEPNLIDCLMVSPACGTMSIELGPQAG
                     RTLGCHVEILKLLSDYDDWRPSLASLLQPIPFPKEALAHEKFTKELKYVIQRFAEDPR
                     QEVHSCLLSVRAGKDGWFQLYSPGGVACDDDGELFASMVHILMGSCYKTKKFLLSLAE
                     NKLGPCMLLALRGNQTMAEILCLMLEYNIIDNNDTQLQIISTLESTDVGKRMYEQLCD
                     RQRELKELQRKGGPTRLTLPSKSTDADLARLLSSGSFGNLENLSLAFTNVTSACAEHL
                     IKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETPVTDAGLLALSSMKSLCSL
                     NMNSTKLSADTYEDLKAKLPNLKEVDVRYTEAW"
     exon            1..300
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            301..426
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            427..477
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            478..639
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            640..681
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            682..744
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            745..825
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            826..929
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            930..1034
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            1035..1388
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            1389..1454
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            1455..1481
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            1482..1530
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            1531..1638
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            1639..1755
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            1756..1896
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            1897..1944
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            1945..2091
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            2092..2197
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            2198..2268
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
     exon            2269..2498
                     /gene="Cmip"
                     /gene_synonym="c-Mip; RGD1306101"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggatgtga cgagcagctc gggcggcggc gacccccggc agatcgagga gaccaagccg
       61 ctgctaggga gcgacgtgtc ggcccccgag ggcaccaagg tgatgggcgc cgtgccttgc
      121 cgccgggccc tgctgctttg caacgggatg aggtacaagc tgctgcagga gggcgacatt
      181 caagtctgtg tcatccggca ccctcggacc tttctcagca agatcctcac ctccaaattc
      241 ctgaggcgtt gggagccgca ccacctaacg ctggccgaca acagcttggc atccgccacg
      301 ccgtctgggt acatggaaaa ctcggtctcc tacagcgcca ttgaagacgt tcagccactg
      361 tcctgggaga acgccccgaa gtactgttta cagctcacaa tccctggagg gaccgttctg
      421 ctgcaggctg ccaacagcta cctgcgagat cagtggttcc attctctgca gtggaagaaa
      481 aagatttaca aatacaagaa agtcctgagt aacccgagcc gctgggaggt tgtcttgaag
      541 gagatacgga cactggtcga catggctctc acgtccccgc tgcaggatga ctccatcaac
      601 caggctccac tggaaatcgt ctcaaaactg ctctcggaga acacaaacct gaccactcag
      661 gagcacgaga acatcattgt ggcaattgcg cctctgctgg agaacaacca cccaccacca
      721 gacctctgcg agttcttctg caagcactgc agagagcggc cccggtctat ggtggtcatc
      781 gaggtgttca cgccagtggt tcagaggatc cttaagcata atatggactt cgggaaatgc
      841 ccaaggctga ggctcttcac ccaggagtac atcctcgccc tgaatgagct caacgcaggc
      901 atggaggtgg tcaagaagtt cattcaaagc atgcatggcc ccacagggca ctgcccacac
      961 ccccgggtcc tgcccaacct cgtggctgtg tgcctggctg ccatatattc ctgctatgaa
     1021 gagttcatca acagccgcga caactccccc agcctgaaag agatccggaa cggctgccag
     1081 cagccgtgcg accggaagcc caccttacct ctgcgcctgc tgcaccccag cccggacctg
     1141 gtgtctcagg aagccacatt gtctgagcca cggctcaagt cggtggtcgt ggcctccagc
     1201 gaggtccacg tagaggtgga gcgcaccagc actgccaagc cggcgctgac agccagcacg
     1261 ggcaatgaca gcgagcccaa ccttattgac tgtctcatgg tcagcccggc gtgtggcacc
     1321 atgagcatcg agctgggccc ccaggcaggc cgcacgctcg gctgtcatgt ggagatcctc
     1381 aagctgctgt ccgactatga tgactggaga ccgtctctgg ccagcttgct tcaacccatt
     1441 ccattcccca aagaagctct cgcgcacgag aagttcacaa aggagctgaa gtacgtgatt
     1501 cagaggtttg cagaagatcc aagacaggaa gtccactcgt gtctgctgag cgtgcgggca
     1561 ggcaaggatg gctggttcca gctctacagt cctggagggg tggcctgtga tgatgacggg
     1621 gaactgtttg ccagcatggt gcatatcctc atgggctcct gttacaagac caaaaagttt
     1681 ctgctctcac tggctgaaaa caaactgggc ccctgcatgc tcctggcact gagagggaac
     1741 cagaccatgg cagagatact gtgtttgatg ctggagtaca acatcatcga caacaacgac
     1801 acccagctac agatcatctc cacgctggag agcacagacg tgggcaagcg catgtatgaa
     1861 cagctttgcg accggcagcg ggagttgaag gagctgcaaa ggaaaggcgg acccaccagg
     1921 ctaacactgc cctccaagtc cacggacgcg gacctggccc gcttactgag ctccggctcc
     1981 tttggaaacc tggagaacct cagcttggcc ttcaccaacg tcaccagtgc ctgcgccgag
     2041 cacctcatca aactgccttc tctcaagcag ctcaacctgt ggtccacgca gtttggagac
     2101 gccggcctgc ggctcctgtc ggaacacctc actatgctcc aggtgctgaa cctgtgtgag
     2161 accccagtca ccgacgcggg cttgctggcc ctcagctcca tgaagagtct ttgcagttta
     2221 aatatgaaca gcaccaagct ctcggctgac acctatgagg atctgaaggc caagcttcct
     2281 aatctaaagg aggttgatgt tcgctacaca gaagcctggt gaagccccct gtgtgcacag
     2341 gatggcgtcg cacaaaacaa aaacaaaaaa gaaacaaaac aaacaaaaaa aaatgactct
     2401 tgactaatag ccgtagagca gtgggtcccg gggtggtccc agcacctggc tgcgggatag
     2461 atgggggagt cttagggggg ccgagggagg aagggtgg
//
