LOCUS       NM_001400848             961 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus C-X9-C motif containing 4 (Cmc4), mRNA.
ACCESSION   NM_001400848 XM_017601047
VERSION     NM_001400848.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 961)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On Jan 28, 2022 this sequence version replaced XM_017601047.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.1851875.1,
                                           SRR26360181.2730004.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-563               JAXUCZ010000018.1  140121-140683
            564-631             JAXUCZ010000018.1  144446-144513
            632-961             JAXUCZ010000018.1  146190-146519
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18p13"
     gene            1..961
                     /gene="Cmc4"
                     /note="C-X9-C motif containing 4"
                     /db_xref="GeneID:102546764"
                     /db_xref="RGD:7647017"
     exon            1..563
                     /gene="Cmc4"
                     /inference="alignment:Splign:2.1.0"
     exon            564..631
                     /gene="Cmc4"
                     /inference="alignment:Splign:2.1.0"
     CDS             574..780
                     /gene="Cmc4"
                     /note="cx9C motif-containing protein 4-like"
                     /codon_start=1
                     /product="cx9C motif-containing protein 4"
                     /protein_id="NP_001387777.1"
                     /db_xref="GeneID:102546764"
                     /db_xref="RGD:7647017"
                     /translation="MPRKDPCQKYACELQKCLQANNYSESRCQAALQELPRCCARFPK
                     GVSPVCAGWEKEEEEKSVMGSGSE"
     exon            632..961
                     /gene="Cmc4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcaccaggga gactccgggg ttggtcccgg tagcaaagcg gagaggaggg aggggaggag
       61 gaagcggagg gcggcgggta gggcgggcgg ctgtctggct gggcggcgtc gctccgccgt
      121 ggcggacgtg ggctgtgatt ggatccgagt cagggcagat accttccccg tgctgacgtc
      181 cgtttcgcgc gcccgccggc cctctcgctc gtgagaactc ggcgcggagt attgcgtcac
      241 ggacagcaac ctcgccggcg cggcgtatgt gcatcacgcc gtcggaggcg acgtcgccgc
      301 gagaaagggg caccgtttta aacgtcagcc cggaaacggt tcgtgatcgg tttcctttct
      361 acgtcacgga cctcggggca cttccggctt ccggcctacg gcccccgcgt ccggttttac
      421 tccgcggttc gtcccgggat ccctgcgcac tcgttgcttg agtgtccggt gtggggcggg
      481 ggcggcggcg gtcgtgcgac ccggaagttt tagccgcgct gcgccggagg cggaggaatc
      541 acttccggaa acgtcgtctt ccttctcttg gacatgccgc ggaaggatcc gtgccagaaa
      601 tacgcctgtg agttgcaaaa gtgtttacaa gccaacaact actcggaatc gaggtgccag
      661 gccgccctcc aggaactgcc tcggtgctgc gcccggttcc ccaagggggt gtcgcccgtg
      721 tgcgcgggat gggagaaaga agaggaagag aagtcggtca tggggtccgg gtccgagtga
      781 agcggtgtcc ggacattcac ttccacttcc ggtttccctc gggcttcatt tcctatcctt
      841 ccttcaagcc tggtagcggc tgagggcaaa ttaatgtgtg gagaatacat gtgtgtaatg
      901 tacgcagaat aaatgtgttc aatggagaag gatccgctaa aataaacctg ctttacattg
      961 a
//
