LOCUS       NM_001402212             877 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus C-x(9)-C motif containing 2 (Cmc2), transcript
            variant 4, mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001402212 XM_006255699
VERSION     NM_001402212.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   Horn,D., Zhou,W., Trevisson,E., Al-Ali,H., Harris,T.K., Salviati,L.
            and Barrientos,A.
  TITLE     The conserved mitochondrial twin Cx9C protein Cmc2 Is a Cmc1
            homologue essential for cytochrome c oxidase biogenesis
  JOURNAL   J Biol Chem 285 (20), 15088-15099 (2010)
   PUBMED   20220131
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Mar 8, 2022 this sequence version replaced XM_006255699.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ229378.1, SRR26360186.1660113.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMN12840110 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-353               JAXUCZ010000019.1  61880416-61880768   c
            354-460             JAXUCZ010000019.1  61870845-61870951   c
            461-532             JAXUCZ010000019.1  61856886-61856957   c
            533-877             JAXUCZ010000019.1  61852128-61852472   c
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..877
                     /gene="Cmc2"
                     /note="C-x(9)-C motif containing 2"
                     /db_xref="GeneID:100363376"
                     /db_xref="RGD:2324599"
     exon            1..353
                     /gene="Cmc2"
                     /inference="alignment:Splign:2.1.0"
     exon            354..460
                     /gene="Cmc2"
                     /inference="alignment:Splign:2.1.0"
     CDS             380..619
                     /gene="Cmc2"
                     /note="isoform 1 is encoded by transcript variant 4; COX
                     assembly mitochondrial protein 2 homolog; rCG51296-like"
                     /codon_start=1
                     /product="COX assembly mitochondrial protein 2 homolog
                     isoform 1"
                     /protein_id="NP_001389141.1"
                     /db_xref="GeneID:100363376"
                     /db_xref="RGD:2324599"
                     /translation="MHPDLSPHLHTEECNVLINLLKECHKNHNILKFFGHCNDLDREM
                     RKCLKNEYMEKRNRSREHGAAMRSRLSDPPEETGR"
     exon            461..532
                     /gene="Cmc2"
                     /inference="alignment:Splign:2.1.0"
     exon            533..877
                     /gene="Cmc2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 accctcttgg tctgtacctg ggctctacta gtgtcactcc taggccgaga tcgcgtggcg
       61 ggactgcgct gtggcaaggc ccccgtagag atctgaggcc tggctcccgt agtcctcctg
      121 ccgccctccg agtcccaacc ggtatcgctg aagcctacct aaccagtccg catcgcccac
      181 cgcgccggca gcacttcccg ccgaggcgct ttcgaagccg ccaatggccg ctcgggcccc
      241 gcccagctaa caaggtctcc gcactgcttc ggctgcccag gggctgcggc tgtgggcgcc
      301 ggatggaaaa cgctctggat ccccagagtc gctctactta cggacaggat caggtctgca
      361 cctactcgtc ctccaaacga tgcatcctga cttgtctcca cacttgcaca ctgaagaatg
      421 caacgtcttg attaacttgc ttaaggaatg tcacaaaaat cacaacattc tgaaattttt
      481 tggtcattgc aacgatcttg atcgggaaat gaggaagtgc ttgaagaatg agtacatgga
      541 gaagaggaac aggagcaggg agcacggcgc tgcgatgcga agcaggcttt ctgatcctcc
      601 agaggaaact ggaagatagg ctcactggat gcctcggctg ggagacctga aggtggccgg
      661 tagctgaaaa aaaatccctt ccttttggcc tctaggaccc tttgaatgga aagcactcta
      721 tgaagaactg agccgtggag aatcaggaga acatggggtc cgggacttgc tgaactttaa
      781 tgccatgcac tgtgcctctg aaagtttcct ccactgctgc cctgaatctg tgtctaccca
      841 ggcctgactc gcctcctgca ataaaggctt agcacag
//
