LOCUS       NM_001402211             643 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus C-x(9)-C motif containing 2 (Cmc2), transcript
            variant 3, mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001402211 XM_002728618
VERSION     NM_001402211.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Horn,D., Zhou,W., Trevisson,E., Al-Ali,H., Harris,T.K., Salviati,L.
            and Barrientos,A.
  TITLE     The conserved mitochondrial twin Cx9C protein Cmc2 Is a Cmc1
            homologue essential for cytochrome c oxidase biogenesis
  JOURNAL   J Biol Chem 285 (20), 15088-15099 (2010)
   PUBMED   20220131
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Mar 8, 2022 this sequence version replaced XM_002728618.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV722600.1, SRR26643291.41981.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840110, SAMN12840112
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-224               JAXUCZ010000019.1  61880035-61880258   c
            225-296             JAXUCZ010000019.1  61856886-61856957   c
            297-643             JAXUCZ010000019.1  61852126-61852472   c
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..643
                     /gene="Cmc2"
                     /note="C-x(9)-C motif containing 2"
                     /db_xref="GeneID:100363376"
                     /db_xref="RGD:2324599"
     exon            1..224
                     /gene="Cmc2"
                     /inference="alignment:Splign:2.1.0"
     CDS             141..383
                     /gene="Cmc2"
                     /note="isoform 2 is encoded by transcript variant 3; COX
                     assembly mitochondrial protein 2 homolog; rCG51296-like"
                     /codon_start=1
                     /product="COX assembly mitochondrial protein 2 homolog
                     isoform 2"
                     /protein_id="NP_001389140.1"
                     /db_xref="GeneID:100363376"
                     /db_xref="RGD:2324599"
                     /translation="MRLFSFPRQPCEVHPCPCPWTFARNTHLHNILKFFGHCNDLDRE
                     MRKCLKNEYMEKRNRSREHGAAMRSRLSDPPEETGR"
     exon            225..296
                     /gene="Cmc2"
                     /inference="alignment:Splign:2.1.0"
     exon            297..643
                     /gene="Cmc2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtcggggct ggaacttact cctgagggag ttgcgggctc cgcgtccgtg gcttctttca
       61 gtgcttccct tgagggctga gtggcggtga gtgtcgggtg tccatcagcc tcccggcatg
      121 cgggagcctg cggcgggagg atgcggctct tcagcttccc acgccagccg tgcgaggtgc
      181 acccatgtcc gtgcccttgg acctttgcta ggaacactca cttgcacaac attctgaaat
      241 tttttggtca ttgcaacgat cttgatcggg aaatgaggaa gtgcttgaag aatgagtaca
      301 tggagaagag gaacaggagc agggagcacg gcgctgcgat gcgaagcagg ctttctgatc
      361 ctccagagga aactggaaga taggctcact ggatgcctcg gctgggagac ctgaaggtgg
      421 ccggtagctg aaaaaaaatc ccttcctttt ggcctctagg accctttgaa tggaaagcac
      481 tctatgaaga actgagccgt ggagaatcag gagaacatgg ggtccgggac ttgctgaact
      541 ttaatgccat gcactgtgcc tctgaaagtt tcctccactg ctgccctgaa tctgtgtcta
      601 cccaggcctg actcgcctcc tgcaataaag gcttagcaca gtg
//
