LOCUS       NM_001402209             612 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus C-x(9)-C motif containing 2 (Cmc2), transcript
            variant 1, mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001402209 XM_002728617
VERSION     NM_001402209.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Horn,D., Zhou,W., Trevisson,E., Al-Ali,H., Harris,T.K., Salviati,L.
            and Barrientos,A.
  TITLE     The conserved mitochondrial twin Cx9C protein Cmc2 Is a Cmc1
            homologue essential for cytochrome c oxidase biogenesis
  JOURNAL   J Biol Chem 285 (20), 15088-15099 (2010)
   PUBMED   20220131
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Mar 8, 2022 this sequence version replaced XM_002728617.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AW916609.1, BF282737.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN12840110,
                                           SAMN12840112 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                JAXUCZ010000019.1  61880173-61880258   c
            87-193              JAXUCZ010000019.1  61870845-61870951   c
            194-265             JAXUCZ010000019.1  61856886-61856957   c
            266-612             JAXUCZ010000019.1  61852126-61852472   c
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..612
                     /gene="Cmc2"
                     /note="C-x(9)-C motif containing 2"
                     /db_xref="GeneID:100363376"
                     /db_xref="RGD:2324599"
     exon            1..86
                     /gene="Cmc2"
                     /inference="alignment:Splign:2.1.0"
     exon            87..193
                     /gene="Cmc2"
                     /inference="alignment:Splign:2.1.0"
     CDS             113..352
                     /gene="Cmc2"
                     /note="isoform 1 is encoded by transcript variant 1; COX
                     assembly mitochondrial protein 2 homolog; rCG51296-like"
                     /codon_start=1
                     /product="COX assembly mitochondrial protein 2 homolog
                     isoform 1"
                     /protein_id="NP_001389138.1"
                     /db_xref="GeneID:100363376"
                     /db_xref="RGD:2324599"
                     /translation="MHPDLSPHLHTEECNVLINLLKECHKNHNILKFFGHCNDLDREM
                     RKCLKNEYMEKRNRSREHGAAMRSRLSDPPEETGR"
     exon            194..265
                     /gene="Cmc2"
                     /inference="alignment:Splign:2.1.0"
     exon            266..612
                     /gene="Cmc2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtcggggct ggaacttact cctgagggag ttgcgggctc cgcgtccgtg gcttctttca
       61 gtgcttccct tgagggctga gtggcggtct gcacctactc gtcctccaaa cgatgcatcc
      121 tgacttgtct ccacacttgc acactgaaga atgcaacgtc ttgattaact tgcttaagga
      181 atgtcacaaa aatcacaaca ttctgaaatt ttttggtcat tgcaacgatc ttgatcggga
      241 aatgaggaag tgcttgaaga atgagtacat ggagaagagg aacaggagca gggagcacgg
      301 cgctgcgatg cgaagcaggc tttctgatcc tccagaggaa actggaagat aggctcactg
      361 gatgcctcgg ctgggagacc tgaaggtggc cggtagctga aaaaaaatcc cttccttttg
      421 gcctctagga ccctttgaat ggaaagcact ctatgaagaa ctgagccgtg gagaatcagg
      481 agaacatggg gtccgggact tgctgaactt taatgccatg cactgtgcct ctgaaagttt
      541 cctccactgc tgccctgaat ctgtgtctac ccaggcctga ctcgcctcct gcaataaagg
      601 cttagcacag tg
//
