LOCUS       NM_001014026            2041 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus clarin 3 (Clrn3), mRNA.
ACCESSION   NM_001014026 XM_219425
VERSION     NM_001014026.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC078942.1.
            
            On Apr 20, 2005 this sequence version replaced XM_219425.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC078942.1, CK482261.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5756307,
                                           SAMN12840109 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q41"
     gene            1..2041
                     /gene="Clrn3"
                     /gene_synonym="RGD1305043; Tmem12"
                     /note="clarin 3"
                     /db_xref="GeneID:309082"
                     /db_xref="RGD:1305043"
     exon            1..354
                     /gene="Clrn3"
                     /gene_synonym="RGD1305043; Tmem12"
                     /inference="alignment:Splign:2.1.0"
     CDS             126..806
                     /gene="Clrn3"
                     /gene_synonym="RGD1305043; Tmem12"
                     /note="transmembrane protein 12"
                     /codon_start=1
                     /product="clarin-3"
                     /protein_id="NP_001014048.1"
                     /db_xref="GeneID:309082"
                     /db_xref="RGD:1305043"
                     /translation="MPTTQKTLMFLSGFLTSLGSVVVICSILGTQAWITSKIFFTDTI
                     SNGTIAITYGLFRGTSSQDLNEGLQELDKNFEVLGILSNSSQKSLHVVVIILLILSLA
                     ASLLSSMFTFYNSISNPYQTFLGPMGVYTWNGLSASFVFLTMVLFVGNVDSNHLSEKL
                     SQTLYPDAINKKTTHTYGYSFWLILLVILLNIVTVVIIIFYQKARYHQKQEQRKPVEY
                     APRDGILF"
     exon            355..534
                     /gene="Clrn3"
                     /gene_synonym="RGD1305043; Tmem12"
                     /inference="alignment:Splign:2.1.0"
     exon            535..2015
                     /gene="Clrn3"
                     /gene_synonym="RGD1305043; Tmem12"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcacgtctt acattcgcaa ctaagtgcta gacttccttt ctaaacactg gatcccaaat
       61 gataaggccc ccaaatattc taagattgct gttgtcttat cctggggagc tttcttcctg
      121 agaaaatgcc aaccacacag aaaacgttga tgttcctgtc tggctttctc acaagcctgg
      181 gctcagttgt tgtcatctgt tctattctgg ggacacaggc atggatcacc agcaagattt
      241 tcttcacaga cactatctcc aatggtacca ttgctatcac ctatgggctt tttcgtggta
      301 cgagtagtca agatttgaac gaaggccttc aagagctgga caaaaacttt gaagttttag
      361 ggatattgag caattcttcc cagaagtccc tgcatgtggt ggtcatcata ctcctgatcc
      421 tgagtctggc agcttccttg ctgagctcaa tgttcacctt ctacaacagc atcagcaacc
      481 cttaccagac gttcctggga cctatgggag tctacacctg gaatggactc agtgcatcct
      541 ttgtgtttct gaccatggtt ctgtttgtgg ggaatgtcga ctccaaccat ctctccgaaa
      601 agctgtccca gacactttat ccagatgcca ttaacaagaa aacaacccac acttatggat
      661 actcattttg gctcatcctg cttgtcatcc tactgaatat tgtcaccgtg gtcatcatca
      721 ttttctatca gaaggcccga taccatcaga agcaggagca gaggaagcca gtggagtacg
      781 ctccgaggga tggcatttta ttctgagatc tgtctcaaag cacattcgca ctgtctctgc
      841 caagctggct agctcctctg gacacggcgt ggcagagcaa ctgtcaggtg ccataactct
      901 ggaaccatga cactgtgtgc ttcctataga tggtgcttgt acctttctcc atggaccttt
      961 ctccctgaga agcgttttct cccaagatca ggaaaatgag tgggaaaggc tgtggtctag
     1021 agtactctga aagaaagtgg tctatggcct gcaggccctt ctcatttgac cttgctattc
     1081 atactataaa ggcctgtggg gatttttttg cctttcctgt gactagataa tgaattgtgg
     1141 cccctatgac cttgtcctct ggattgatta ggcattttgc ttcatggtaa gtatgaagac
     1201 ttttaggtag agaagcactc tgaacctctt tttccagtca gaagttagat gcagaaggat
     1261 aaaggatgag atgatctctt gttctggtcc cctggtggct gtcctggctc ccaggcttag
     1321 ctcctttaat gagggctaga tgcttataga acttgggact cgggaagccc cacacaaaca
     1381 ggctagaggt aaaatatggt ctcttccagt aaattggaag tcagcaaaat aacaaaggca
     1441 ccaaaattta ttctacgtgt tttttccagt atgacatttc ctttaaaaaa tctaatagag
     1501 aacccttcag ccttgactat cctgtaggtt gctatggtga aaactgacag gtctgaaaaa
     1561 tgaccccttt catgtgttga tggagtctta aagcagtaac tttgtgacaa gtggtggatc
     1621 ttatgaacct caaagataag tggccttcaa cactcagact tagagatgtg agctgggttc
     1681 ccatgatgtc agtggaagcg tgctgggtcc tcaaccttgt ggtatttatg tttactactg
     1741 ggtagatgag acagacattt aataagctct tacttgactc cagttgaaac agttgcttag
     1801 agttgggggt catccctcca ttgtagagta ctaaaaagcc tagcatgtaa caggtcctgg
     1861 gttccatctc tacctctgta aaaatgaaac aacatctaat gacaacatcg tgcttgtgtt
     1921 ttgaaaggat ggatttctat catgctctac cttgaagatt tactaattca aggttactct
     1981 tacctactaa attattaaaa gtttactgta ctttaaaaaa aaaaaaaaaa aaaaaaaaaa
     2041 a
//
