LOCUS       NM_001191097            1352 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus clarin 2 (Clrn2), mRNA.
ACCESSION   NM_001191097 XM_001071050
VERSION     NM_001191097.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000014.1.
            
            On Oct 4, 2022 this sequence version replaced NM_001191097.1.
            
            Sequence Note:.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-385               JAXUCZ010000014.1  69878466-69878850   c
            386-565             JAXUCZ010000014.1  69872224-69872403   c
            566-1352            JAXUCZ010000014.1  69868556-69869342   c
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14q11"
     gene            1..1352
                     /gene="Clrn2"
                     /note="clarin 2"
                     /db_xref="GeneID:689515"
                     /db_xref="RGD:1591112"
     exon            1..385
                     /gene="Clrn2"
                     /inference="alignment:Splign:2.1.0"
     CDS             133..831
                     /gene="Clrn2"
                     /codon_start=1
                     /product="clarin-2"
                     /protein_id="NP_001178026.1"
                     /db_xref="GeneID:689515"
                     /db_xref="RGD:1591112"
                     /translation="MPGWFKKVWYGLASLLSFSSFLLIIVALALPHWLSGKILCQTGV
                     DLVNATDPELVKFIGDIYYGLFRGCKVRQCGLGGRQSQFTIFPHLVKELNAGLHITIL
                     LLLFLALALALVSMGFAILNIIQVPYRAVNGPGGICLWNVLAGGVVALAISSFMAAVK
                     FHDLTERIANFQERLFQFVVVEEQYEESFWICVASASAHAANLVVVAISQIPLPEVKT
                     KMEEATVTPEDILY"
     exon            386..565
                     /gene="Clrn2"
                     /inference="alignment:Splign:2.1.0"
     exon            566..1352
                     /gene="Clrn2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaagctgag gaggcaggca ctgagggatg ataagttagt gtgtatggag caggctattc
       61 ccaactgtct gaaagatgtc tacttgttca actgttgccc agagccctgg gggatgattc
      121 gcactcacta gcatgcctgg atggttcaag aaggtgtggt atgggctggc gtctctactc
      181 agtttctctt ccttccttct gatcatcgtc gccttggctc tgcctcattg gttgagcggg
      241 aaaatcttgt gtcagactgg agtggatttg gtcaatgcca cagacccaga actggtcaaa
      301 ttcatcgggg acatttacta cggtctcttc cgaggctgca aggtgcggca atgtggactc
      361 gggggccgcc agtcccagtt tacaatcttc ccgcatctgg tgaaggagct caacgcaggc
      421 ctgcacatca ctattctctt gctcctcttc ctggccttgg ccctggctct ggtcagcatg
      481 ggctttgcta ttctcaacat cattcaggtc ccctacagag cggtcaatgg ccctggtggc
      541 atctgccttt ggaatgtcct tgcaggtggc gtcgtggcat tagccatcag cagcttcatg
      601 gctgcagtga agtttcatga cctgacagaa aggatcgcca acttccagga gaggcttttt
      661 cagtttgtag tggtggaaga acagtatgaa gaatcgtttt ggatctgtgt ggcaagtgcc
      721 tcggcccacg cagcaaactt ggtcgtggtg gccattagtc aaattcccct cccggaagtc
      781 aagactaaaa tggaagaggc tacagttacc cccgaggaca tcttatactg ataacggact
      841 cctgctcaca ccttgtgacg tcaatggggg cacaggcttg acttttccag cttcctcgct
      901 ccacagtgcg cccattcttg gtagtaagaa gaaggctctg aagggactac aggagtccca
      961 gagaggaaaa aactgtcctg atgaccaggg cacttgtgct tctttatgat gatgcccttg
     1021 aagatgaact ggagactcct gaacttgtca gctgtatcta acactcacta attctcagtt
     1081 ccctcatctg tcaaaagtgg aggtaataaa aactttgcat gctctgttgt gacgtcccaa
     1141 cggtgctgct ggtgatgcca caagcgcagt tctctacaaa taagttacat atactccatt
     1201 acgattcggt agggccttga tctgttctct acagtattgg aatgtgcaaa gaagactgtg
     1261 ctgatcatgt ctctattctt gagaagtagt aatgtattac ccagaatttc aagtatctaa
     1321 gaatggaaat aagtgtgggt ttctgagctg cc
//
