LOCUS       NM_001134716            1441 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus C-type lectin domain family 12, member A
            (Clec12a), mRNA.
ACCESSION   NM_001134716 XM_001056731 XM_001067785
VERSION     NM_001134716.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Li K, Neumann K, Duhan V, Namineni S, Hansen AL, Wartewig T,
            Kurgyis Z, Holm CK, Heikenwalder M, Lang KS and Ruland J.
  TITLE     The uric acid crystal receptor Clec12A potentiates type I
            interferon responses
  JOURNAL   Proc Natl Acad Sci U S A 116 (37), 18544-18549 (2019)
   PUBMED   31451663
REFERENCE   2  (bases 1 to 1441)
  AUTHORS   Raulf MK, Johannssen T, Matthiesen S, Neumann K, Hachenberg S,
            Mayer-Lambertz S, Steinbeis F, Hegermann J, Seeberger PH,
            Baumgartner W, Strube C, Ruland J and Lepenies B.
  TITLE     The C-type Lectin Receptor CLEC12A Recognizes Plasmodial Hemozoin
            and Contributes to Cerebral Malaria Development
  JOURNAL   Cell Rep 28 (1), 30-38 (2019)
   PUBMED   31269448
REFERENCE   3  (bases 1 to 1441)
  AUTHORS   Flornes LM, Nylenna O, Saether PC, Daws MR, Dissen E and Fossum S.
  TITLE     The complete inventory of receptors encoded by the rat natural
            killer cell gene complex
  JOURNAL   Immunogenetics 62 (8), 521-530 (2010)
   PUBMED   20544345
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168186.1.
            
            On or before Sep 5, 2008 this sequence version replaced
            XM_001067785.1, XM_001056731.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168186.1, GU357484.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..1441
                     /gene="Clec12a"
                     /note="C-type lectin domain family 12, member A"
                     /db_xref="GeneID:680338"
                     /db_xref="RGD:1592991"
     exon            1..292
                     /gene="Clec12a"
                     /inference="alignment:Splign:2.1.0"
     CDS             202..1011
                     /gene="Clec12a"
                     /codon_start=1
                     /product="C-type lectin domain family 12 member A"
                     /protein_id="NP_001128188.1"
                     /db_xref="GeneID:680338"
                     /db_xref="RGD:1592991"
                     /translation="MSEEIVYADLKFQDSDKKEESQKSDKCGRKVPSAGSYSQHKTVL
                     ILILLCLLLFIGVVALGCIFYTTLETEMIKSNQLQRVKEELQENVSLQLMHNLNNSKK
                     IKTLSAMLQNIATQLCQELSKKEPGHKCKPCPKASDWYKDSCYSRFQKYATWQESVEF
                     CSARNASLLKVKNKDELEFIKSKELYNYWLALPPSKMYRSYELLSEKMFLSEGFKRST
                     YDITKMSCGFIRGEYVYYTNCDEEKYTMCEETASKVQVESVLSDLPEGSIL"
     exon            293..391
                     /gene="Clec12a"
                     /inference="alignment:Splign:2.1.0"
     exon            392..580
                     /gene="Clec12a"
                     /inference="alignment:Splign:2.1.0"
     exon            581..732
                     /gene="Clec12a"
                     /inference="alignment:Splign:2.1.0"
     exon            733..839
                     /gene="Clec12a"
                     /inference="alignment:Splign:2.1.0"
     exon            840..1357
                     /gene="Clec12a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atctgttctt gtctgaggcc acagactgac tgtggctcat gggcacatat ttgagagact
       61 agcatagtag tttttcaaaa agaaattcca gctcgtgagg cggtttacca agggttgaat
      121 gtctaggaag acttgcttaa cagtcagccc tctcaccttt ttcaaaggac ggtttctgga
      181 gctttctctg aatattcatc aatgtctgag gaaattgttt atgcagatct caaattccag
      241 gactctgata agaaagaaga aagccagaag tctgacaaat gtgggagaaa agtaccttct
      301 gctggttcct attcacaaca taaaacagtc ttgattctga ttcttctatg ccttctgctg
      361 tttattggag tggtggcctt aggatgcatc ttttatacaa ctttggagac agaaatgata
      421 aagtcaaatc aattacaaag agtcaaggaa gaacttcagg aaaatgtttc cctacagctg
      481 atgcacaatc tcaacaactc caagaaaatc aagactcttt ctgctatgct gcaaaacata
      541 gccacccagt tgtgtcaaga actgtcaaag aaagaaccag gtcataaatg taaaccatgt
      601 ccaaaggctt cagattggta caaggacagc tgttattctc gattccagaa gtatgcaaca
      661 tggcaagaga gtgttgagtt ctgctctgct cggaatgcca gcctcctgaa ggttaagaac
      721 aaggatgagc tggaatttat aaagtccaag gagctataca attattggct agcattgcct
      781 ccaagtaaaa tgtatagatc ttatgagcta ctgagtgaga agatgttcct ctctgaaggg
      841 tttaaaagaa gcacatatga cataactaag atgtcctgtg gctttataag gggggaatat
      901 gtttattata caaactgtga tgaagagaaa tataccatgt gtgaagagac agccagcaag
      961 gtacaggtgg aaagtgtgct aagtgacctt ccagagggta gcattctgta gttgcttgtc
     1021 tctagctact atcctactat agtggtttga atgagaatgg cccccggcgg ctcatttgtt
     1081 tgattatgtg gtcctcagtt gctggaactg tttcagaagc atgggaaggt gtgaccttgt
     1141 ttgaggaggt gcatcactga ggatgggctt tgagttttca aaagctcctg ccattcccag
     1201 ttagttctgt ctctgtctgt gtttgtgaat tgagctgtga gctcacagct actcttcaag
     1261 gccgtgtttg cctgcctgct gccatcctcc tcaccacaat ggtcatagac tctaaccctc
     1321 tggaaccagg agccaaatta aatgcatcct ttcataaaaa aaaaaaaaaa aaaaaaaaaa
     1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1441 a
//
