LOCUS       NM_022393               1523 bp    mRNA    linear   ROD 07-AUG-2024
DEFINITION  Rattus norvegicus C-type lectin domain containing 10A (Clec10a),
            mRNA.
ACCESSION   NM_022393
VERSION     NM_022393.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Natarajan,G., Perriotte-Olson,C., Casey,C.A., Donohue,T.M. Jr.,
            Talmon,G.A., Harris,E.N., Kabanov,A.V. and Saraswathi,V.
  TITLE     Effect of nanoformulated copper/zinc superoxide dismutase on
            chronic ethanol-induced alterations in liver and adipose tissue
  JOURNAL   Alcohol 79, 71-79 (2019)
   PUBMED   30611703
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Sato,K., Imai,Y., Higashi,N., Kumamoto,Y., Onami,T.M., Hedrick,S.M.
            and Irimura,T.
  TITLE     Lack of antigen-specific tissue remodeling in mice deficient in the
            macrophage galactose-type calcium-type lectin 1/CD301a
  JOURNAL   Blood 106 (1), 207-215 (2005)
   PUBMED   15784728
REFERENCE   3  (bases 1 to 1523)
  AUTHORS   Gulyas,A.I., Cravatt,B.F., Bracey,M.H., Dinh,T.P., Piomelli,D.,
            Boscia,F. and Freund,T.F.
  TITLE     Segregation of two endocannabinoid-hydrolyzing enzymes into pre-
            and postsynaptic compartments in the rat hippocampus, cerebellum
            and amygdala
  JOURNAL   Eur J Neurosci 20 (2), 441-458 (2004)
   PUBMED   15233753
  REMARK    GeneRIF: MGL is presynaptic enzyme of hippocampus, cerebellum and
            amygdala.
REFERENCE   4  (bases 1 to 1523)
  AUTHORS   Ii,M., Kurata,H., Itoh,N., Yamashina,I. and Kawasaki,T.
  TITLE     Molecular cloning and sequence analysis of cDNA encoding the
            macrophage lectin specific for galactose and N-acetylgalactosamine
  JOURNAL   J Biol Chem 265 (19), 11295-11298 (1990)
   PUBMED   2358462
REFERENCE   5  (bases 1 to 1523)
  AUTHORS   Ii,M., Kawasaki,T. and Yamashina,I.
  TITLE     Structural similarity between the macrophage lectin specific for
            galactose/N-acetylgalactosamine and the hepatic asialoglycoprotein
            binding protein
  JOURNAL   Biochem Biophys Res Commun 155 (2), 720-725 (1988)
   PUBMED   3421964
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC091151.1.
            
            On Mar 27, 2005 this sequence version replaced NM_022393.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091151.1, FQ221204.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..1523
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /note="C-type lectin domain containing 10A"
                     /db_xref="GeneID:64195"
                     /db_xref="RGD:621158"
     exon            1..185
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /inference="alignment:Splign:2.1.0"
     exon            186..378
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /inference="alignment:Splign:2.1.0"
     CDS             312..1232
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /note="macrophage asialoglycoprotein-binding protein 1;
                     MMGL; M-ASGP-BP; macrophage
                     galactose/N-acetylgalactosamine-specific lectin;
                     M-ASGP-BP-1; macrophage galactose N-acetyl-galactosamine
                     specific lectin 1; monoglyceride lipase;
                     Gal/GalNAc-specific lectin; C-type lectin domain family
                     10, member A"
                     /codon_start=1
                     /product="C-type lectin domain family 10 member A"
                     /protein_id="NP_071788.2"
                     /db_xref="GeneID:64195"
                     /db_xref="RGD:621158"
                     /translation="MTMAYENFQNLGSEEKNQEAGKAPPQSFLCNILSWTHLLLFSLG
                     LSLLLLVVISVIGSQNSQLRRDLETLRTTLDNTTSNTKAELQALASRGDSLQTGINSL
                     KVEVDDHGQELQAGRGLSQKVASLESTVEKKEQTLRTDLSEITDRVQQLGKDLKTLTC
                     QLASLKNNGSAVACCPLHWMEHEGSCYWFSQSGKPWPEADKYCQLENSNLVAVNSLAE
                     QNFLQTHMGSVVTWIGLTDQNGPWRWVDGTDYEKGFTHWAPKQPDNWYGHGLGGGEDC
                     AHFTSDGRWNDDVCQRPYRWVCEMKLAKDS"
     exon            379..489
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /inference="alignment:Splign:2.1.0"
     exon            490..585
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /inference="alignment:Splign:2.1.0"
     exon            586..657
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /inference="alignment:Splign:2.1.0"
     exon            658..729
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /inference="alignment:Splign:2.1.0"
     exon            730..816
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /inference="alignment:Splign:2.1.0"
     exon            817..968
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /inference="alignment:Splign:2.1.0"
     exon            969..1075
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /inference="alignment:Splign:2.1.0"
     exon            1076..1488
                     /gene="Clec10a"
                     /gene_synonym="Mgl; Mgl1; Mgll"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttgaaatcg gatgtcccca aatacagacc actggacgca aaacccagca agactctgtc
       61 atgtgtactc ctggcttctg cttggtccct cccacaccaa ccctctagga tatagttctc
      121 cactctgact gactgagttc ccacctctgg ccactgctgc acagggaagc cacgatttca
      181 cacagttcca ggacttacct cagcttcaca ctgcttctga cactctcctt ggtcccagct
      241 cagtatctgt ctggattctg gtgtctcggt ttcagttcag atagccctag aggccttgtg
      301 tttgtgcaag catgacaatg gcatatgaaa acttccagaa cttggggagc gaagagaaaa
      361 accaagaggc tggtaaagct cctccccagt ccttcctgtg caatatcctc tcttggaccc
      421 acctcctcct gttctccctg ggccttagcc tcctgctgct ggtggttatc tccgtgattg
      481 gatcccaaaa ttcccagtta aggagggacc tagaaaccct gagaaccact ttagacaaca
      541 ccacctccaa caccaaggct gaactacagg ccctggcctc caggggtgac agcttgcaaa
      601 cagggatcaa ttctctgaaa gtggaggtgg atgatcatgg gcaggaactg caggcaggcc
      661 gaggcttgag ccagaaggtg gcttctctgg agagcacagt ggagaagaag gagcagactc
      721 tcagaacaga tctatctgaa ataaccgatc gtgtgcaaca gctggggaag gacttgaaga
      781 ccctgacatg tcagctggcc agcctcaaga acaacggctc agcagtggcc tgctgccccc
      841 ttcactggat ggagcatgaa ggcagctgct actggttctc tcagtctggg aagccgtggc
      901 ctgaagctga caagtactgc cagctggaga attctaacct agtggcggtc aactccctgg
      961 cggagcagaa ttttctacag actcacatgg gcagtgtggt cacttggatt ggcctaacgg
     1021 accaaaatgg gccctggcga tgggtggacg ggaccgacta tgagaaaggc tttacgcact
     1081 gggccccaaa gcagccagat aactggtatg gacacgggct gggaggaggc gaggactgtg
     1141 cacacttcac ctcagatggt cgctggaatg atgacgtttg ccagaggccc taccgctggg
     1201 tctgtgagat gaagctggcc aaggacagct aggagcactc tccaagtaat ttatttcttc
     1261 agtggtttta gctggggaag cctggagttt ggactcctcc tatcccattt caatgttatt
     1321 tgggactttt ctttttgtca aaaaatttaa gtcaaggaga aaggattgtg tttgagatgg
     1381 tagtgtggtg tccggaagaa tggggttatt gaaatctgtg gtattttgta cagagtgccg
     1441 cttattgtag gactttttaa tgtaacaaaa ataaaatact gttggtttaa aaaaaaaaaa
     1501 aaaaaaaaaa aaaaaaaaaa aaa
//
