LOCUS       NM_001109143             745 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus claudin domain containing 2 (Cldnd2), mRNA.
ACCESSION   NM_001109143 XM_001080337 XM_574434
VERSION     NM_001109143.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 745)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473979.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001080337.1, XM_574434.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..745
                     /gene="Cldnd2"
                     /gene_synonym="RGD1566413"
                     /note="claudin domain containing 2"
                     /db_xref="GeneID:499140"
                     /db_xref="RGD:1566413"
     exon            1..105
                     /gene="Cldnd2"
                     /gene_synonym="RGD1566413"
                     /inference="alignment:Splign:2.1.0"
     exon            106..287
                     /gene="Cldnd2"
                     /gene_synonym="RGD1566413"
                     /inference="alignment:Splign:2.1.0"
     CDS             119..622
                     /gene="Cldnd2"
                     /gene_synonym="RGD1566413"
                     /codon_start=1
                     /product="claudin domain-containing protein 2"
                     /protein_id="NP_001102613.1"
                     /db_xref="GeneID:499140"
                     /db_xref="RGD:1566413"
                     /translation="MGVKKSLQTGGNLLNLLSSVLTVLSTTTSYWIRQQGGHSGLWQE
                     CTHGVCSNMPCQNTLAVTTACMVLAAAFSIVALGMGIRIQCQEAESLRSQNTIVLLFL
                     SGLLLLIALTVYTAKNAWKPEVFFSWSYFFGWLALPFSFIAGFCFLLADMIMQSTEAI
                     SGFPVCL"
     exon            288..428
                     /gene="Cldnd2"
                     /gene_synonym="RGD1566413"
                     /inference="alignment:Splign:2.1.0"
     exon            429..548
                     /gene="Cldnd2"
                     /gene_synonym="RGD1566413"
                     /inference="alignment:Splign:2.1.0"
     exon            549..745
                     /gene="Cldnd2"
                     /gene_synonym="RGD1566413"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttaaaaggct gctaggggag agggttctgg aatctctgcg gcctcacaga gaaccatcct
       61 cccttccccc aaccccgtgg gctctctgtc ccaggggacc aggctctgcc tccttggcat
      121 gggggtgaag aagagccttc agactggagg caatttgctt aatctcttga gcagcgtcct
      181 cacagtacta tccactacta ccagctactg gatccgacaa caagggggac acagtggcct
      241 atggcaggag tgtacccatg gcgtctgctc caacatgccc tgccagaaca ccttggcagt
      301 gaccacagca tgcatggtgc tggcagcagc cttcagtatc gtagctttgg ggatggggat
      361 aaggattcag tgtcaagagg ccgagtcact acgtagccaa aataccattg tcttactttt
      421 tctcagcggg ctgctgctgc tgattgcatt gaccgtatac actgcaaaga atgcctggaa
      481 gccagaagtc ttcttctcct ggtcctactt tttcggatgg ttggctttac ccttctcgtt
      541 tattgcgggc ttctgctttc tgcttgccga catgatcatg cagagcaccg aagccatcag
      601 cgggttccca gtgtgcctgt gaatgcggcc tgcctggggc agaataaagg aatggctttt
      661 agcatcgtcc ctgcgtgctt ttctgcggaa cgtagagaca taagcttgaa gactacaggg
      721 acacggataa agtgacttgt agaga
//
