LOCUS       NM_001408916             858 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus claudin 34C4 (Cldn34c4), mRNA.
ACCESSION   NM_001408916 XM_006257208
VERSION     NM_001408916.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 858)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Jul 1, 2022 this sequence version replaced XM_006257208.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.32865.1,
                                           SRR26360181.2820865.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-150               JAXUCZ010000021.1  94396617-94396766   c
            151-858             JAXUCZ010000021.1  94391092-94391799   c
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq31"
     gene            1..858
                     /gene="Cldn34c4"
                     /gene_synonym="Cldn34c"
                     /note="claudin 34C4"
                     /db_xref="GeneID:100361422"
                     /db_xref="RGD:2320143"
     exon            1..150
                     /gene="Cldn34c4"
                     /gene_synonym="Cldn34c"
                     /inference="alignment:Splign:2.1.0"
     exon            151..858
                     /gene="Cldn34c4"
                     /gene_synonym="Cldn34c"
                     /inference="alignment:Splign:2.1.0"
     CDS             173..811
                     /gene="Cldn34c4"
                     /gene_synonym="Cldn34c"
                     /note="claudin-34"
                     /codon_start=1
                     /product="claudin 34C4"
                     /protein_id="NP_001395845.1"
                     /db_xref="GeneID:100361422"
                     /db_xref="RGD:2320143"
                     /translation="MALFNKSANHQIRGFALATIAWIMCSASMGLPEWRIWYLEEPKV
                     SSPSVAFIGIWRACICNHIDNSIRQRVCHHYSYRNALVPLDIRLAQHLLLIANIIGLV
                     GTIRAVFALQKLYMEKLQKNDDNNPFVLSAVLNAVASTFIFLAIMCNYFSVPNKEVVC
                     FLPSFQMPLFPYAQRVGSAMGVASVSAILFLLSAIIFISYCPSMENENLPLV"
ORIGIN      
        1 ggctcagggt ttgtaccttc aatactctag ccaagaatac agagctagga gggacatttg
       61 aagagctctg tttcctttct ttgggctccc ttgtcctagg tatcacacat tcctgccaca
      121 tcactggtta acttgaagac agcaattctg tttctacata tttgatgcca gcatggcatt
      181 gttcaacaag tctgccaatc accaaataag aggtttcgcc ttggccacca ttgcatggat
      241 aatgtgcagc gcatctatgg gccttccaga atggcgaatt tggtatttgg aagaacccaa
      301 ggtttcctcc ccaagcgtgg cttttatagg tatttggaga gcctgtattt gcaaccacat
      361 tgacaactcc atccgccaga gagtttgcca tcactacagc tatcgtaatg cccttgttcc
      421 tttggatatc cggttagctc aacatctgct cctgattgca aacattattg gtctggttgg
      481 gacaattcgt gctgtctttg ctctacagaa gttatacatg gagaagctgc agaagaatga
      541 cgacaacaat ccctttgttc tttcagctgt cctcaatgct gttgctagca cctttatttt
      601 tcttgctatt atgtgtaatt acttctctgt gccaaacaag gaagtggtat gtttcctgcc
      661 ttctttccaa atgccgcttt ttccatatgc tcaaagagtg ggaagtgcca tgggagtggc
      721 aagtgtatct gccatactgt ttttgttaag tgctataatt tttatttctt actgtccttc
      781 aatggaaaat gaaaatcttc cccttgtttg aaaataaatt tacagcatgc ataatcctga
      841 aaatccaata ttcttggt
//
