LOCUS       NM_001109366            3973 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus claudin 34A (Cldn34a), mRNA.
ACCESSION   NM_001109366 XM_001064790 XM_001068935 XM_039099990
VERSION     NM_001109366.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3973)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On or before Aug 30, 2022 this sequence version replaced
            XM_039099990.1, NM_001109366.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3011              JAXUCZ010000021.1  25212812-25215822
            3012-3973           JAXUCZ010000021.1  25232113-25233074
FEATURES             Location/Qualifiers
     source          1..3973
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq13"
     gene            1..3973
                     /gene="Cldn34a"
                     /note="claudin 34A"
                     /db_xref="GeneID:503435"
                     /db_xref="RGD:1594343"
     exon            1..3011
                     /gene="Cldn34a"
                     /inference="alignment:Splign:2.1.0"
     exon            3012..3973
                     /gene="Cldn34a"
                     /inference="alignment:Splign:2.1.0"
     CDS             3029..3664
                     /gene="Cldn34a"
                     /codon_start=1
                     /product="claudin 34A"
                     /protein_id="NP_001102836.1"
                     /db_xref="GeneID:503435"
                     /db_xref="RGD:1594343"
                     /translation="MILFNKGSSCQVGGFALSTIAWILCITSMGLPQWRVWYSKEPVI
                     SYPTVAFVGVWKTCIYHHDNFSNIRMCYQYSYHDTFVPLDIRVAQHLMLITCIFCLIG
                     KAATVVALRNVYTGRQERDVTYNAFGLSAVLNIIASSFVFLAVLCNYFSIINNEGIAF
                     PPSFHMPFYPHIQQVGIAMVVAFLAAILFLCSGVIFISFTFPLNIQVLPNI"
ORIGIN      
        1 ttgacagaat ctccctatgt agccctggtt gtcctgaaat ttgctgttac agaagaagtg
       61 ggtctcaaat tcacagaaat ctgcctgcct ctgcctccta aatactgggg ccaaaagtat
      121 gcattacaat gcccagatgc ttcctgagtc aaaatggaat ggttcagttc agattaattt
      181 gtttcacaat acccccagcc cccaaaagtt tttcttcaat ccatttacac ataattttct
      241 aggtctgcct cctagctcat aattgacaat acctttgcat gtctgtgctc tcctatgatg
      301 tgccttgttc ctctcatgct tgcagttcta ttttgacttg ctcaacaact tgttttaatt
      361 gtcctgtcag ttaacaaact ccagctgaac actttgagaa agagcatttc ctaagtgctg
      421 gcattttaac tagctatagt atatcaggta caacatgata ctagtacttt tagtgctact
      481 tgggtttgat acataaacac attgctccag gaagggaaag cacacttcct gtttaaattt
      541 tctaatcaga tttgtactta agcctcgtgg attctaaaac ttcctgatag tttgattctc
      601 tggtggcccc tgtttccatc agtgatcaca ctgggatccc caaaagtcac tttccaatgt
      661 gttttcttct aattagctga gaagcttttt aaagtttggg tttatcttct atgaccagtt
      721 cgttattcca ctatcaaatt catacagaca aacaaggtaa aagcttgact ctttcctcta
      781 atatttttat atctaaagtt aagagaaata tcaaactggc tttcatgtca tgaaggtata
      841 ttttacttta tttttgtttg acttttgctt tttcctttgt ttatattgaa tcatataagg
      901 aagtgaatca cttccttata tgacctcatg agatatttct agatttcttt tttttttgcc
      961 aagctgtgac tgtttattaa ttgaccagat tataaaaata caatgggcaa taccttagtt
     1021 cattcatcta gtaagcctgt ttatctggtc ttccctgttg ccagcatctc caccttctac
     1081 aaagtgagtt gtctttttct tcattccacc tcatggggaa gatagtttga aggaccatta
     1141 ataataaaaa cctcccttcc aaggtagatt gcttcaactg acaagactca gtgatatata
     1201 gaaggtgaat agtagaaacc cttatgttct gcattgcaat agtatctagc cattacaaga
     1261 cctacagagg tccaagctag atggggtctc agtgttgaga gggggaagaa gttcttatcc
     1321 ctaaccatga agctattatc aattgatgtg tacttgcaaa tgaaaaattt attttttcaa
     1381 tagagtggac tagttgcctc aagtgccaag cacctgaaat tcctgaccag gtagttgttg
     1441 ttgttgttgt tgatggtgat gatgattatt aatattattg gtttgtgttc tctctctctc
     1501 tctctctctc tctctctgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgca
     1561 tacgcacgca atataagata tagggtgctg ttggacctgc cttggatagt atgattgctt
     1621 gctaaggtaa agcagggagc catcagtgtt cttgaggggt ttgaacacat ggagtttgcc
     1681 tataaatgag gtctgtggcg agattcctag aaaactgcag atatgtatct gggaaaggag
     1741 aaaggtctga agcagttgtt aattgtgctg gaattcttgc ttccctgata gcaatggctt
     1801 caactagatt cttgggttag ggatggctct ccattctcat gttcctataa taatagttcc
     1861 tgtcttccta tcatgcctca atagcaacat ggagggcacc atgaggaaag atagaccaag
     1921 catgcttact cagatctctc tgggtatagc catgagtgtg cagatcactg gatttttaaa
     1981 agaagaaaac ataatctgac aacttgtttg gcacctatgt ggggctttga agaaattttg
     2041 aagcaagtca ttttaacaga agcttagata agcagttatt tttatggaag gggttccata
     2101 caaacaggca gttttaacat aaactaagat aactagggca ctctgatctt tggttttttg
     2161 agtagagctg ggtagttttc catggtattc ttcatcaaga agatgaaatt ccagttaaag
     2221 ttgaaatggc ctcttccaga atacaagatg gagggacatc tgctctgtct cacctcaaca
     2281 cattagctct caattacttc tccagcacaa tgtcttcctg catggtacca tgctttcctc
     2341 catgatgata atggactaaa tctccagaac tgtaagcaag tcccaattaa atatttagag
     2401 ttgccttgtt catggtgtct cttcacagca ataaaacact gactaggata ggattcaaaa
     2461 cctctttctg atatcagcag gcaccaggca ttcataaggc acataagatg taggcaaaac
     2521 ttttacacag atgaagtaaa gacaaataac acttaaaact tttaaaaagt aattttaatc
     2581 ctgaggcaac tcaggtagac tgtgtacagg aattctttgg gacaatcaga aatagtgcat
     2641 ttgtttagat tacaatctgg aatgattatg catttcatgt ggatcaaaaa tgtgggtaaa
     2701 aggaataaag aggcaaggct ggtcctcaaa ggtaagtggc tctatatctg ggagcacaag
     2761 agaaaactct agcctatgtg ttaatttcct agagagatac catctcaagt tactagaaaa
     2821 tactagaaag gtgacaacat cctgtcaatg tgtggtagtt taactttgtg tttctgttgg
     2881 actgctcagc agtgtttctt attacacgtg actacccagg atatgagccc tgcgctctgc
     2941 tgattggcat gatccctagg atggatgagg aatggaccaa ctgtacaaca catgagcagt
     3001 cttttgctaa gttgtgttca ctgtcatcat gatattgttc aacaaaggtt ccagttgcca
     3061 ggtaggaggt tttgctttgt ccaccatagc atggattctt tgcatcactt ccatgggcct
     3121 cccacagtgg cgagtgtggt actcgaagga acctgtgatc tcttacccta ctgtggcctt
     3181 tgtgggagtg tggaaaacct gcatctacca ccatgacaac ttcagcaata ttagaatgtg
     3241 ttaccaatac agctaccatg acaccttcgt tcctttggat attcgtgttg ctcagcacct
     3301 gatgttgatc acctgcattt tctgcctgat tggaaaagca gccactgttg ttgctcttag
     3361 aaatgtgtac acaggaagac aagagcggga tgtcacctac aatgcctttg gcctttcagc
     3421 ggttctgaac atcattgcca gtagctttgt cttccttgct gtcttgtgca attatttctc
     3481 catcataaac aatgaaggga ttgcttttcc accatctttc catatgcctt tttacccaca
     3541 tattcagcag gttggcattg ccatggtagt ggcatttcta gcagccatcc tgtttttgtg
     3601 cagtggtgtg attttcattt ctttcacatt tcccttaaac atacaagttc ttcctaatat
     3661 ctgaaactga atgtacttca ccttgaaaaa caatccaaaa cttcatgttg ctacagcaag
     3721 gatttttgag atgactaaaa tttccaagga ctcagcaatg tccaaatggc ctgtgacaga
     3781 aaatggccaa atgcctcttt attatctttt ctgtctcatt tgttttatta cttcattggt
     3841 cggattatgg actttcatta aaatgaactt acctacttgt caagtgatct tatgaaatta
     3901 cagttttaat tgatggcact gaaggaaaaa tgattaataa acctagaata tatgaaaatg
     3961 aatgtcagag cac
//
