LOCUS       NM_001008377            1700 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus clathrin binding box of aftiphilin containing 1
            (Clba1), mRNA.
ACCESSION   NM_001008377 XM_343118
VERSION     NM_001008377.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC086564.1.
            
            On Dec 16, 2004 this sequence version replaced XM_343118.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086564.1, SRR8487226.163046.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132264, SAMD00132265
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q32"
     gene            1..1700
                     /gene="Clba1"
                     /gene_synonym="RGD1307315"
                     /note="clathrin binding box of aftiphilin containing 1"
                     /db_xref="GeneID:362793"
                     /db_xref="RGD:1307315"
     exon            1..561
                     /gene="Clba1"
                     /gene_synonym="RGD1307315"
                     /inference="alignment:Splign:2.1.0"
     CDS             142..1107
                     /gene="Clba1"
                     /gene_synonym="RGD1307315"
                     /note="uncharacterized protein C14orf79 homolog;
                     clathrin-binding box of aftiphilin-containing protein 1"
                     /codon_start=1
                     /product="uncharacterized protein CLBA1"
                     /protein_id="NP_001008378.1"
                     /db_xref="GeneID:362793"
                     /db_xref="RGD:1307315"
                     /translation="MQGGREVGRESVSDLAEELGEGSLHPTAGGQSGDSLERRRIGYD
                     GPVILPDANANSSRLDEGLSSSRPHPGELGGGWGEFEGFQESSAKSEEFSQSFELLGR
                     AAECQPLRTPSTPKEGGSCQVQQGGPWVTGTAAGPSSESILSYEKVFRLAFQEVPVEQ
                     ATEDVCSLDRFLETGSEETAPVPRLCSESRKLWRALQNTDTVSASRCLWSESHCRENL
                     FPVLGIDAAQKSLSGDQGHDLEGSDCRKPEDLLGVSGFHLHHCKALIQTKLSGTSGSR
                     QGSLITYSLFLKTPLQGNGRYITIPQKKIFTPRNLKMAFFNNNVC"
     exon            562..698
                     /gene="Clba1"
                     /gene_synonym="RGD1307315"
                     /inference="alignment:Splign:2.1.0"
     exon            699..828
                     /gene="Clba1"
                     /gene_synonym="RGD1307315"
                     /inference="alignment:Splign:2.1.0"
     exon            829..945
                     /gene="Clba1"
                     /gene_synonym="RGD1307315"
                     /inference="alignment:Splign:2.1.0"
     exon            946..1675
                     /gene="Clba1"
                     /gene_synonym="RGD1307315"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctggtccccc tcgcgtgcca ggcggggtcg actccacaga ggcacgtgaa cgctcccagg
       61 aagccctggg caactccagc tcagcagctg catgttttct gagcagcttt ccttcgggtc
      121 ggctggcctg gccacaccaa gatgcaaggc gggcgggagg tggggagaga gtcagtgagt
      181 gacctcgcag aggaacttgg agaggggtcc ctccacccga cagccggagg acagagtggt
      241 gatagtttgg aacggaggag gatcggctac gacggtcccg tgattctgcc ggacgccaat
      301 gctaacagct ccaggctgga tgagggtctt tcctccagcc gtccacaccc aggggagctc
      361 ggcggcgggt ggggagagtt cgaaggcttc caagagtctt cagctaagtc tgaggagttt
      421 tctcagtctt ttgaactcct gggaagggcc gcggaatgtc agccgctgag aaccccttcc
      481 acacctaaag agggcggttc ttgccaggtg cagcagggtg gaccctgggt gacaggaact
      541 gctgctggcc cgtcttcaga gtccattctc agctacgaga aggttttcag gcttgcgttt
      601 caagaagtcc cggtggaaca ggcaaccgaa gacgtttgtt ctttggaccg tttcttagaa
      661 acaggcagcg aagaaactgc acctgtgcct agactgtgtt ccgaatctag gaaactctgg
      721 agagcccttc agaacaccga caccgtgtct gcatcgaggt gtctctggag tgaatctcac
      781 tgccgggaaa acctctttcc tgtccttggc atagatgctg ctcagaagag cctttctgga
      841 gaccagggtc atgatctgga aggttctgac tgcagaaagc ctgaagatct gctgggagtc
      901 agtggtttcc acctacacca ctgcaaagcc ctgattcaga ccaagctctc agggacatcg
      961 ggcagcagac agggcagcct gattacctac agtctgtttc tgaagacacc actccaaggg
     1021 aatgggcgct acatcaccat cccacagaag aagatcttta ctccacgcaa cctgaaaatg
     1081 gcattcttta ataacaacgt ctgctaaagg ccggagtgct ttgtaccttt atgagacatt
     1141 ttacattttc ttactggttt gcttgggtac tagaacttga gaattctgtg gcactgtttc
     1201 ccagggccgt gttagtttcc taggacctgt caaacacatg cactcagatc tgatagggtg
     1261 cacagaagga atgtctttgt gcagagccag cccccatgga atttccgggg acaccgtagg
     1321 ctggcaccag gtgcctgttg acccctacct gcaggctcac agttggaccc atgagtttca
     1381 gaagtcagaa ggtagctact gatcactggc aggaacatgc cctgcgcctc ctgcccccac
     1441 ccctgtgctg tttcctgggg agttaacctg tctctgtgtt agatcctgcc atcaacagcc
     1501 tcagggacaa gctttactct gagtaggagg gtgggaagga gaacacactg ggtgtcctgg
     1561 gaagacagct ggatgagctt ccttggtcac ctgctgaaac gggttctact ccaggggcat
     1621 acacaagcag gctgcactac attttgtaaa tttttattaa aaagaaagga ccgtaaaaaa
     1681 aaaaaaaaaa aaaaaaaaaa
//
