LOCUS       NM_001025694            1624 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ciliary microtubule inner protein 2A (Cimip2a),
            mRNA.
ACCESSION   NM_001025694 XM_231047
VERSION     NM_001025694.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097396.1.
            
            On Aug 31, 2012 this sequence version replaced NM_001025694.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097396.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1624              BC097396.1         2-1625
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..1624
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /note="ciliary microtubule inner protein 2A"
                     /db_xref="GeneID:311797"
                     /db_xref="RGD:1562762"
     exon            1..223
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /inference="alignment:Splign:2.1.0"
     exon            224..283
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /inference="alignment:Splign:2.1.0"
     exon            284..368
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /inference="alignment:Splign:2.1.0"
     exon            369..451
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /inference="alignment:Splign:2.1.0"
     exon            452..577
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /inference="alignment:Splign:2.1.0"
     CDS             522..1487
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /note="protein FAM166A; family with sequence similarity
                     166, member A"
                     /codon_start=1
                     /product="ciliary microtubule inner protein 2A"
                     /protein_id="NP_001020865.1"
                     /db_xref="GeneID:311797"
                     /db_xref="RGD:1562762"
                     /translation="MTATQKHNLFTPEPHYIPGYAGFYPQLRYQVGNTYGRTTAQLLT
                     DPSVQKSPCSVLSPMSKPKFIEDFSKSKPPWMPCRDLTEPYIPHYTNLKPYKNFEILG
                     KLPRQEVDTQGMPQGENISRHVPLPAGFMPYPPYPPCPPGRKGEARDLGHPGLLLAYG
                     EEAWKNAAPLQETPGRYHQLYHCRRDEYLPPHPPQETLDVGRYQRLPQLDHPNLIQRK
                     AISGYAGFVPRFAWVMGMNYRDGVIQAMDDFDKNQFVFKHPVCTLGERLPKTHWPTTT
                     IYRSQGLIPFYMGFIPSMQDNYAMTFGNSTRRAYQKELERRSQTL"
     exon            578..792
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /inference="alignment:Splign:2.1.0"
     exon            793..1058
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /inference="alignment:Splign:2.1.0"
     exon            1059..1185
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /inference="alignment:Splign:2.1.0"
     exon            1186..1280
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /inference="alignment:Splign:2.1.0"
     exon            1281..1398
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /inference="alignment:Splign:2.1.0"
     exon            1399..1597
                     /gene="Cimip2a"
                     /gene_synonym="Fam166a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcactggcc ctgactgata cttttctgga tagacggatg gagacatgag gaaacaagtt
       61 tgatttgaac aaagggacca caggctgcct ggagcctcct cctacactgt gcagtgtcct
      121 ttgagaacga attgatggta ttaaggtacc tggtgtggag ggttcttatg tgactccggt
      181 tcctccctgt aaaaactact gctgtgggga taggaatggc ttggtttatg tacttgagtg
      241 cagatgctca gaggccaggc ctgttggcag ttgggaaata ctgaacccac aaggtgaaag
      301 agataaccag ctccccaaaa gttgtcatct gacccccaca ggagtgctac agcacgtgta
      361 tacacccaga gaacaagcct attggagagt ccacacagct gtccatctgg gaatcctgac
      421 tcagaactga cttcctcagt gaaggactag ggcaacaggt ctcttcaggg aaggaaggcg
      481 gacacagaaa gggctgaacc agcaaggaca gagtcaagca aatgacagct actcagaaac
      541 acaacctctt cactccagaa ccccactaca tccctggcta tgctggtttc tatcctcaac
      601 tgcgctacca ggtgggaaac acctatggcc gcactactgc acagttgctc acagatccca
      661 gtgtacagaa gagcccctgc tctgttctgt cacctatgtc caagcccaag ttcattgagg
      721 acttcagcaa atccaagcca ccatggatgc cctgcaggga cctgacagag ccttacatcc
      781 cccactatac caatctgaaa ccctacaaga atttcgagat tctgggcaag ctcccacgcc
      841 aggaggtgga cacccagggg atgccacagg gagagaacat atccagacat gttccactac
      901 ctgcgggctt catgccttat cccccctacc caccatgccc tccaggcaga aagggggaag
      961 ctagagacct gggccatcca ggtctactgc tggcatatgg ggaagaggct tggaagaatg
     1021 cagcacctct tcaggagacc ccagggaggt accaccagct ataccactgc aggagggacg
     1081 agtacctgcc tccacatccc ccacaggaga cactagatgt gggcagatac cagcgactgc
     1141 cccagctaga ccaccccaac ctaatccaac gcaaggccat ctcaggttat gctggctttg
     1201 ttccccggtt tgcctgggta atggggatga attatcgtga tggagtcata caagcgatgg
     1261 atgactttga caagaaccag tttgtgttca agcacccagt ctgtacgctg ggtgaaaggc
     1321 tgcccaagac ccactggcca accaccacca tctacagaag ccaaggcctc attcctttct
     1381 acatgggctt catcccatcc atgcaggaca actatgcaat gaccttcggt aacagcaccc
     1441 ggagagccta tcagaaggaa ctggagaggc gcagccagac actatgaatt gctttaatgg
     1501 tggtatctgt acaagtgatg tcaggacaca ggacagcaaa tgcacagtgg acatggctag
     1561 cagacaagct gtgaatgaat aaagagttca cactgctaaa aaaaaaaaaa aaaaaaaaaa
     1621 aaaa
//
