LOCUS       NM_001108151             977 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus ciliary microtubule associated protein 1C
            (Cimap1c), mRNA.
ACCESSION   NM_001108151 XM_001073897 XM_236270
VERSION     NM_001108151.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 977)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473975.1.
            
            [WARNING] On Apr 12, 2024 this sequence was replaced by
            NM_001108151.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_236270.4, XM_001073897.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132294,
                              SAMEA5760383 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..977
                     /gene="Cimap1c"
                     /gene_synonym="Odf3l1; RGD1304976"
                     /note="ciliary microtubule associated protein 1C"
                     /db_xref="GeneID:315695"
                     /db_xref="RGD:1304976"
     CDS             1..828
                     /gene="Cimap1c"
                     /gene_synonym="Odf3l1; RGD1304976"
                     /note="outer dense fiber protein 3-like protein 1; outer
                     dense fiber of sperm tails 3-like 1"
                     /codon_start=1
                     /product="protein CIMAP1C"
                     /protein_id="NP_001101621.1"
                     /db_xref="GeneID:315695"
                     /db_xref="RGD:1304976"
                     /translation="MKQFERARNYVFYAQHPEKEEEVPSWQEIKQTPVVMATIKGPGP
                     AKYLRPSCTGYIAHDISMFQEPAFSLHTRHTKKRITDENSPGPCYFLDPKVTRFGIST
                     CPQVPMEERIPNLRITSTPASCYYNLQKTQPSGERRPPQYSFGYRCPYRVMDPNPAPN
                     RYKLPSSLGPNVPNLSTAPCYGLASTNKNWFHKENIAGGPGPAMRTRPEPSVYQNRSP
                     VFSMAKRFAYPLDHTLRPGPGSHNIQPVTVHKPRIPAFTMGIKHSPHLCPLIVDICD"
     exon            1..121
                     /gene="Cimap1c"
                     /gene_synonym="Odf3l1; RGD1304976"
                     /inference="alignment:Splign:2.1.0"
     exon            122..232
                     /gene="Cimap1c"
                     /gene_synonym="Odf3l1; RGD1304976"
                     /inference="alignment:Splign:2.1.0"
     exon            233..346
                     /gene="Cimap1c"
                     /gene_synonym="Odf3l1; RGD1304976"
                     /inference="alignment:Splign:2.1.0"
     exon            347..977
                     /gene="Cimap1c"
                     /gene_synonym="Odf3l1; RGD1304976"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaaacagt tcgagagggc caggaactat gtgttctacg cacagcaccc agagaaggag
       61 gaagaggtac cctcatggca ggaaatcaag cagacccctg ttgtcatggc cacaatcaaa
      121 ggtccagggc ctgccaagta cctgcggcca tcttgtactg gctacatagc ccatgacatc
      181 tccatgttcc aggagccagc cttcagtctg catacacggc acactaagaa acggatcact
      241 gacgaaaaca gccctggacc ttgctatttt ttggatccca aagtaactcg ttttggaata
      301 tctacctgtc cccaggttcc catggaggag cgcatcccca acctacgcat aactagtacg
      361 ccagcctctt gctactacaa cctccagaag acccaaccct ctggggaacg taggcctccc
      421 cagtactctt ttggctatcg gtgtccatat agagtgatgg accccaatcc ggctcctaac
      481 cggtacaagc tgccatcctc tctggggccc aacgtcccca acctctcaac tgccccttgc
      541 tatggtctgg cttccacaaa caagaactgg ttccacaagg agaatatagc aggaggtcct
      601 ggacctgcta tgcgtacgcg acctgagccg tctgtctacc agaaccgcag ccccgtgttt
      661 agcatggcca agcgctttgc ctaccctctg gaccacacac ttcggcctgg cccaggctcc
      721 cacaacatcc agccagtcac tgtgcacaag ccccgcatcc ctgccttcac catgggcatc
      781 aaacactcac cccacttgtg cccattgatt gtggacattt gtgactgagg ctcctgctag
      841 tgcatgcccc tcctgcctct cagatgctat tttcctagat cacattgagc aacttgaccg
      901 tgaattcctg taacagagct ggtgtctgct gagtggccag cacacagagg cactggataa
      961 atattttcgt ttattca
//
