LOCUS       NM_001108924            1141 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus ciliary microtubule associated protein 1A
            (Cimap1a), mRNA.
ACCESSION   NM_001108924 XM_001058033 XM_344975
VERSION     NM_001108924.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Nakamura,Y., Tanaka,H., Koga,M., Miyagawa,Y., Iguchi,N., Egydio de
            Carvalho,C., Yomogida,K., Nozaki,M., Nojima,H., Matsumiya,K.,
            Okuyama,A. and Nishimune,Y.
  TITLE     Molecular cloning and characterization of oppo 1: a haploid germ
            cell-specific complementary DNA encoding sperm tail protein
  JOURNAL   Biol Reprod 67 (1), 1-7 (2002)
   PUBMED   12079992
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473953.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001058033.1, XM_344975.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760383, SAMEA5760389
                              [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q41"
     gene            1..1141
                     /gene="Cimap1a"
                     /gene_synonym="Odf3"
                     /note="ciliary microtubule associated protein 1A"
                     /db_xref="GeneID:365387"
                     /db_xref="RGD:1310028"
     exon            1..131
                     /gene="Cimap1a"
                     /gene_synonym="Odf3"
                     /inference="alignment:Splign:2.1.0"
     exon            132..248
                     /gene="Cimap1a"
                     /gene_synonym="Odf3"
                     /inference="alignment:Splign:2.1.0"
     CDS             140..910
                     /gene="Cimap1a"
                     /gene_synonym="Odf3"
                     /note="outer dense fiber protein 3; outer dense fiber of
                     sperm tails 3"
                     /codon_start=1
                     /product="ciliary microtubule associated protein 1A"
                     /protein_id="NP_001102394.1"
                     /db_xref="GeneID:365387"
                     /db_xref="RGD:1310028"
                     /translation="MAEEVWVGTWRPHRPRGPIMALYTSPGPKYLIPPTTGFVKHTPT
                     KLRAPAYSFRGAPMLLAENCSPGPRYSVNPKILRTGKDLGPAYSILGRYHTKTLLTPG
                     PGDYFPEKSTKHVFDSAPSHSISARTKTFRVDSTPGPAAYMLPVVMGPHTVGKVSQPS
                     FSIKGRSKLGSFSDDLHKARTPGPAAYRQTEVQVTKFKAPQYTMAARVEPPGDKTMKP
                     GPGAHSPEKVTLNKPCAPTVTFGIKHSDYMTPLVVDVE"
     exon            249..449
                     /gene="Cimap1a"
                     /gene_synonym="Odf3"
                     /inference="alignment:Splign:2.1.0"
     exon            450..551
                     /gene="Cimap1a"
                     /gene_synonym="Odf3"
                     /inference="alignment:Splign:2.1.0"
     exon            552..679
                     /gene="Cimap1a"
                     /gene_synonym="Odf3"
                     /inference="alignment:Splign:2.1.0"
     exon            680..820
                     /gene="Cimap1a"
                     /gene_synonym="Odf3"
                     /inference="alignment:Splign:2.1.0"
     exon            821..1141
                     /gene="Cimap1a"
                     /gene_synonym="Odf3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgggggagaa agagaagctt tctctccatg ctccttttta gggaattgcc tggcacagac
       61 gccaggggga caggccatcg gtgaggaggc taggtcctaa gctgctctaa gcccattcct
      121 gcacggagga gagccagcca tggcagagga ggtatgggtg ggcacctgga ggccccatcg
      181 tccccggggg cccatcatgg ccctctacac cagtcctgga cccaagtacc tgattccacc
      241 taccacgggc tttgtgaagc acacacccac caagcttcga gcaccggcct acagcttccg
      301 tggggccccc atgctcttgg cggagaattg ctccccaggg cctcgctaca gtgtgaaccc
      361 caagatcctg aggactggca aggaccttgg ccctgcctac tccatcctgg ggcgctacca
      421 tacaaagacc ttgctgaccc ccggcccggg tgattacttt ccagagaaat ctaccaagca
      481 tgtgttcgac tcagcaccca gccattccat ttctgcccgg actaagacct tccgagtgga
      541 cagcactcca ggccctgccg catacatgct gcctgtggtg atggggcccc acacggtggg
      601 caaggtctcc cagccctcct tctccatcaa gggccgcagc aagctgggca gcttcagcga
      661 tgacctgcac aaggcaagga ctccaggtcc tgcagcatac cgtcagactg aggttcaagt
      721 gaccaagttc aaggctccac agtacaccat ggctgcccgt gtggagcccc caggggataa
      781 gaccatgaag ccaggaccag gagcccacag ccctgaaaag gtgaccctaa acaagccctg
      841 tgccccgaca gtcacctttg gcatcaagca ttctgactac atgacacccc tggtggttga
      901 tgtggaatag ctcctgctct ccatcccatc agtctgtgac tagatcctcc cacagaaatg
      961 tgctgggctg gcaatgattg ggcacttcac caatgggggc tgctgccagc ctgggcctgc
     1021 atcacagagc acgctagttt ggacggtttt gacaagttat ttttttctat gctatctctt
     1081 gtttgttaat cttgtttctt gccatgtcca aattattaaa taaaccacag attgcattcg
     1141 c
//
