LOCUS       XM_008772654            1180 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus CBY1 interacting BAR domain containing
            2 (Cibar2), transcript variant X4, mRNA.
ACCESSION   XM_008772654
VERSION     XM_008772654.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008772654.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1180
                     /gene="Cibar2"
                     /note="CBY1 interacting BAR domain containing 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 4 Proteins, and 97% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:361423"
                     /db_xref="RGD:1560673"
     CDS             149..1027
                     /gene="Cibar2"
                     /codon_start=1
                     /product="CBY1-interacting BAR domain-containing protein 2
                     isoform X2"
                     /protein_id="XP_008770876.1"
                     /db_xref="GeneID:361423"
                     /db_xref="RGD:1560673"
                     /translation="MNVVLSRDSQVRAMENTVTNTERYFGQFCSLLASYTRKTARLRD
                     KADQLVKQLIDFANTETPELRATIRDFAEDLAKVQDYRQAEVERLEAKVISSLKLYGA
                     QIKQTRADIKKCKRVQNNEIKQLEKLEKLRQKSPSDRQMISQAETSAQRASVDTNRST
                     HYLAETVDAFQEQKLKDLQRIFSDFVIIEMVFHAKAVEVYSSAFQTLENYNLETDLQD
                     FRAKMRGIYGHSEARPLTDTNPSPSVPWPLTSQSAQSTMAREGKEAGDEEDSETDSVE
                     EIPLEDLRGQQQGHRG"
ORIGIN      
        1 ttgcctggca accaggcagc agagtccctt gagtctagcc agaccacaca gctgggcccg
       61 gtactagctt gcttttctct gactagggga ccccttgggg ccctgtcctt attccccaag
      121 atccaggcag caggtgccac tgtccacaat gaacgtcgtc ctctccaggg acagccaagt
      181 gagggccatg gagaacacag tgacaaacac tgagaggtat ttcggtcagt tctgctcact
      241 gctggcctcc tacacccgca agacggcgcg gctgcgtgac aaggctgacc agctggtgaa
      301 acagctgata gacttcgcca acacggagac ccctgagctg cgggccacca ttcgagactt
      361 cgccgaggac ctggccaagg tgcaggatta tcggcaggcg gaggttgaga ggctggaggc
      421 caaggtcatc agctccttga agctctacgg tgcccaaata aagcagaccc gggcagatat
      481 caagaaatgc aaacgtgtcc aaaataatga gattaaacaa ctggagaagt tggagaagtt
      541 gaggcagaag tcaccctcag atcgacaaat gatcagccag gcggagacca gtgcacagag
      601 ggcctcggtg gacactaacc gttccaccca ctacctggca gagaccgtgg atgccttcca
      661 ggagcaaaag ctgaaagatc tccagagaat cttctctgac ttcgtgatca tcgagatggt
      721 tttccacgcg aaggcggtgg aggtatactc cagtgctttc cagactctgg agaattacaa
      781 cctggagaca gacctgcagg acttcagagc caagatgcgt ggaatttatg ggcacagcga
      841 agctcggccg ctcacagaca ccaacccctc tccatctgtc ccctggcctc tgaccagtca
      901 gagtgctcag agtaccatgg cccgcgaggg gaaggaggct ggagatgagg aggacagcga
      961 gactgactct gtggaggaga tccccctgga ggacctcagg ggacagcagc aaggacaccg
     1021 aggctaggaa gaaggcctag gctggcctgg acctgggtgc attctgcttg tgttctcggg
     1081 tcagggatcc ccgggggttc attcacctta tcggcacagt aggctgctct gaagacccac
     1141 attcccagtg tcagtaaaat atacgtgaat ctcaactgta
//
