LOCUS       XM_002729463            1312 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus CBY1 interacting BAR domain containing
            1 (Cibar1), transcript variant X1, mRNA.
ACCESSION   XM_002729463
VERSION     XM_002729463.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_002729463.7.
            
            On Jan 21, 2021 this sequence version replaced XM_002729463.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1312
                     /gene="Cibar1"
                     /note="CBY1 interacting BAR domain containing 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 ESTs, 21 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 227 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:297903"
                     /db_xref="RGD:1310681"
     CDS             58..1125
                     /gene="Cibar1"
                     /codon_start=1
                     /product="CBY1-interacting BAR domain-containing protein 1
                     isoform X1"
                     /protein_id="XP_002729509.1"
                     /db_xref="GeneID:297903"
                     /db_xref="RGD:1310681"
                     /translation="MPSGLPCPSLDRRGARRVATETPDRSGGAPGALSAPGGSGGVSC
                     SRAPWRPGAALVGLPSRVPGGAKGKMLRRNLDDRDAQTKQLQDAVTNVEKHFGELCQI
                     FAAYVRKTARLRDKADLLVNEINLYASTETPNLKQGLKDFADEFAKLQDYRQAEVERL
                     EAKVVEPLKAYGTIVKMKRDDLKATLTARNREAKQLSQLERTRQRNPSDRHVISQAET
                     ELQRATIDATRTTRHLEETIDNFEKQKIKDIKNILSEFITIEMLFHGKALEVLTAAYQ
                     NIQKIDEDEDLEVFRNSLYLSDYPSRLDIVRANSKSPLQRPLSTKCTSGTGQVATCRT
                     KKDQHVEDEDDEELDVTEDEN"
ORIGIN      
        1 gccccgaagg gctagagagc tgcactgaag gaggatgctt gatgttccat cagcccaatg
       61 ccctctggtc tcccttgccc ttctcttgac cgccggggcg cgcgccgcgt cgccacggaa
      121 acgccggaca ggagcggcgg cgcgccaggc gcgctctcgg ctcccggtgg aagtggcggc
      181 gtctcctgct cccgcgcgcc ctggcggccc ggagccgcgc tcgttgggct cccatcccgg
      241 gtccccggcg gcgcgaaagg caagatgttg aggcgtaatc tggatgaccg agacgctcaa
      301 acaaaacaac tgcaggatgc tgtcacaaat gtggagaagc attttggaga gctttgccaa
      361 atctttgctg cttatgtacg gaaaactgcc aggcttcgag acaaagccga cctcctggtg
      421 aatgaaatca acctgtatgc ctctaccgag accccaaatt taaagcaggg tctgaaagac
      481 tttgccgatg agtttgccaa acttcaagat taccgccagg cagaggttga aagacttgaa
      541 gccaaagtag ttgaaccttt gaaagcttat gggaccattg taaagatgaa acgagatgat
      601 ctcaaagcaa cattaacagc aaggaatcga gaagccaaac agttatctca gttagaaagg
      661 acacgccagc gaaacccatc ggatcgacat gtaatttcgc aggcagaaac tgaattacag
      721 agagccacaa ttgatgctac ccgcaccact cgtcatctgg aggaaactat tgacaatttt
      781 gaaaagcaga aaataaagga cataaagaac atattatctg agtttatcac aattgaaatg
      841 ctatttcatg gcaaagcttt agaggtcctc actgccgcct accaaaatat acaaaaaatt
      901 gatgaggatg aagacttaga ggttttccga aattctctgt atctatcaga ttatccatct
      961 cgtttagata ttgtaagagc aaattcaaag tcacctcttc agagaccact gtcaactaag
     1021 tgcacatctg gaactggaca ggtagccacc tgtcgaacaa aaaaggatca acatgtagaa
     1081 gatgaggatg atgaagaatt agatgttaca gaagatgaaa actaatttat aaaagaattc
     1141 acatttctgt tttcatgtca tatgacttga aatgtaggat cactttatac tgacttgcaa
     1201 ggttaaagta taaaataaaa tgctactatg aaactggggg taattaaaga aaattatgct
     1261 aataagaaaa aatgattttt ttctgaaata catacagcct ttgaacatag ta
//
