LOCUS       XM_001068424             817 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus calcium and integrin binding family
            member 4 (Cib4), transcript variant X1, mRNA.
ACCESSION   XM_001068424
VERSION     XM_001068424.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001068424.6.
            
            On Jan 21, 2021 this sequence version replaced XM_001068424.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..817
                     /gene="Cib4"
                     /note="calcium and integrin binding family member 4;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 5 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:688819"
                     /db_xref="RGD:1584147"
     CDS             96..653
                     /gene="Cib4"
                     /codon_start=1
                     /product="calcium and integrin-binding family member 4
                     isoform X1"
                     /protein_id="XP_001068424.2"
                     /db_xref="GeneID:688819"
                     /db_xref="RGD:1584147"
                     /translation="MGQCLRYQMQWEDLEEYQALTFLTRNEILCIHDTFLKLCPPGKH
                     YKEATLTMDQVSSLPALRVNPFRDRICRVFSHDDVFSFEDVLGMASVFSEQACPSLKI
                     EYAFRIYDFNENGFIDEEDLQKIVLRLLKSDDVSEDLLQDVTHHVLSESDLDNDNMLS
                     FSEFEHAMAKSPDFMNSFRIHFWGC"
ORIGIN      
        1 gctggtcacc atggtaacag aatcaacgga ctgcaccagc tgctgagccc ttgggggttg
       61 aagtcctact gctggcagga ggaggctggg ttggcatggg acagtgtttg aggtaccaga
      121 tgcagtggga ggacctggaa gagtaccagg ctctgacctt cttgacgaga aacgagattc
      181 tgtgcatcca cgacaccttc ctgaagctct gccccccggg caagcactat aaggaggcca
      241 cactgaccat ggaccaggtc agctcccttc cggctctaag ggtcaaccct ttcagagacc
      301 gcatctgcag ggtcttctcc cacgatgacg tgttctcctt tgaagatgtg ctgggtatgg
      361 catctgtctt cagtgaacag gcctgcccca gcctgaagat tgaatatgcc tttcgcatct
      421 atgattttaa cgagaacggc ttcatcgacg aggaagacct ccagaagata gtactaagac
      481 tactgaaaag cgatgatgtg tccgaggacc tgctgcagga cgtcactcac cacgtcctga
      541 gtgagtcaga tctggacaat gacaacatgc tttccttctc cgagttcgaa catgcaatgg
      601 ccaaatctcc ggatttcatg aactcctttc ggattcactt ctgggggtgc tgatgtgaag
      661 tcacctggtt cagcagcttc agggaagact accggacacc ccttccccgc cccacccctg
      721 tatccaggca ctgtggaatc tgatttgaag tatgactcaa ctctgtccct ccttcacctc
      781 tagaatattg tttactaaat aaatatgtgt ctaccca
//
