LOCUS       NM_001191081             707 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus calcium and integrin binding family member 3
            (Cib3), mRNA.
ACCESSION   NM_001191081 XM_001062162
VERSION     NM_001191081.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Huang,H., Bogstie,J.N. and Vogel,H.J.
  TITLE     Biophysical and structural studies of the human calcium- and
            integrin-binding protein family: understanding their functional
            similarities and differences
  JOURNAL   Biochem Cell Biol 90 (5), 646-656 (2012)
   PUBMED   22779914
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Sep 1, 2022 this sequence version replaced NM_001191081.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN06621351
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-121               JAXUCZ010000016.1  17656453-17656573
            122-156             JAXUCZ010000016.1  17656758-17656792
            157-268             JAXUCZ010000016.1  17659288-17659399
            269-416             JAXUCZ010000016.1  17662802-17662949
            417-612             JAXUCZ010000016.1  17664386-17664581
            613-707             JAXUCZ010000016.1  17665754-17665848
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..707
                     /gene="Cib3"
                     /note="calcium and integrin binding family member 3"
                     /db_xref="GeneID:685723"
                     /db_xref="RGD:1590245"
     exon            1..121
                     /gene="Cib3"
                     /inference="alignment:Splign:2.1.0"
     CDS             71..634
                     /gene="Cib3"
                     /codon_start=1
                     /product="calcium and integrin-binding family member 3"
                     /protein_id="NP_001178010.1"
                     /db_xref="GeneID:685723"
                     /db_xref="RGD:1590245"
                     /translation="MGNKQTVFSHEQLEEYQDCTFFTRKEIMRLFYRYQDLAPQLVPL
                     DYTTSPEVKVPYELIGSMPELKDNPFRQRIAQVFSQDGDGHMTLENFLDMFSVMSEMA
                     PRDLKAYYAFKIYDFNNDNYICTWDLEQTVTRLTRGELSVEEVTLVCEKVLDEADSDH
                     DGRLSLEDFQNMILRAPDFLSTFHIRI"
     exon            122..156
                     /gene="Cib3"
                     /inference="alignment:Splign:2.1.0"
     exon            157..268
                     /gene="Cib3"
                     /inference="alignment:Splign:2.1.0"
     exon            269..416
                     /gene="Cib3"
                     /inference="alignment:Splign:2.1.0"
     exon            417..612
                     /gene="Cib3"
                     /inference="alignment:Splign:2.1.0"
     exon            613..707
                     /gene="Cib3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtgcacaaa tgcccctgag gagccacctg taatttcagt tccggtggat tcaaggctgc
       61 ggtgtgcagc atgggtaaca agcagactgt gtttagtcac gagcagctgg aggaatacca
      121 ggactgtact ttcttcacga ggaaggagat catgaggctg ttctatcggt accaggactt
      181 ggcccctcag ttggtgcctc ttgactatac caccagcccc gaggtgaagg tgccctacga
      241 gctgatcggg agtatgccgg agctaaagga taaccctttc cgccaaagga ttgcgcaggt
      301 tttctctcaa gatggggatg gtcacatgac cttagagaac ttcttggata tgttctcagt
      361 gatgagtgag atggctccac gggacctgaa ggcctactat gcttttaaga tttatgactt
      421 caacaatgac aactacatct gcacatggga cctggagcag acagtgacca ggctgacccg
      481 tggggagctg agtgtggagg aagtgaccct ggtctgtgag aaggtgctgg atgaagcaga
      541 cagtgaccat gacgggcggc tgtccctaga ggacttccaa aatatgatcc tgcgagcccc
      601 agacttcctc agcaccttcc acatccgcat ctgacacgct cagaggacaa gacctggccc
      661 tcacccatgt cgactccgct ctctgaataa acaggaattg aaactgc
//
