LOCUS       NM_001408845             990 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus chromatin target of PRMT1-like 1 (Chtopl1), mRNA.
ACCESSION   NM_001408845 XM_006237107
VERSION     NM_001408845.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 990)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Jun 28, 2022 this sequence version replaced XM_006237107.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB579950.1, CB696042.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN14984041 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-567               JAXUCZ010000004.1  164490931-164491497 c
            568-990             JAXUCZ010000004.1  164490370-164490792 c
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..990
                     /gene="Chtopl1"
                     /gene_synonym="Chtop"
                     /note="chromatin target of PRMT1-like 1"
                     /db_xref="GeneID:500378"
                     /db_xref="RGD:1584868"
     exon            1..567
                     /gene="Chtopl1"
                     /gene_synonym="Chtop"
                     /inference="alignment:Splign:2.1.0"
     CDS             162..773
                     /gene="Chtopl1"
                     /gene_synonym="Chtop"
                     /note="chromatin target of PRMT1"
                     /codon_start=1
                     /product="chromatin target of PRMT1-like 1"
                     /protein_id="NP_001395774.1"
                     /db_xref="GeneID:500378"
                     /db_xref="RGD:1584868"
                     /translation="MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQ
                     QQLASARNRRLAQQMENRPSVQAALKLKQKSLKQRLGKSNIQARLGRPIGALARGAIG
                     GRSLPIIQRGLPRGGLRGGRATRTLLRGGMSLRGRGMIGRGRGGFGGRGRGRGRGRGA
                     LTRPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND"
     exon            568..990
                     /gene="Chtopl1"
                     /gene_synonym="Chtop"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacctaccat ttaagcatct aacccaaccg cccagctagt taacccgagc ggtccgccgt
       61 cagctcgggt tcggccggcc tccggcccgc ccgccgcagc cgtggtggca accccaggag
      121 gagcgctggc gtccatctcc ttcgattctc gggatttgaa gatggctgca cagtcagcgc
      181 cgaaagttgt gctaaaaagc accaccaaga tgtctctaaa tgagcgcttt actaatatgc
      241 tgaagaacaa acagccgatg ccagtgaata ttcgggcttc gatgcagcag cagcagcagc
      301 tagccagtgc cagaaacaga agactggccc agcagatgga gaatagaccc tctgtccagg
      361 cagcattaaa acttaagcag aagagcttaa agcagcgcct gggtaagagt aatatccagg
      421 cacggttagg ccgacccata ggtgctctgg ccaggggagc aattggagga agaagccttc
      481 ccataatcca gagaggcttg ccccgaggag gactacgtgg gggacgtgcc accagaaccc
      541 tgcttagggg tgggatgtcg ctccgaggtc ggggtatgat aggtcgggga agagggggct
      601 ttggaggcag aggccgaggt cgtggccgag ggagaggtgc cctcactcgc cctgtattga
      661 ccaaggagca gctggacaac caattggatg catacatgtc gaaaactaaa ggacacctgg
      721 atgctgaatt ggatgcctac atggcacaga cagatcctga aaccaatgat tgaagcctgc
      781 ctgcctgcct gcccacctgt tagactcttg ttaaagtcac cacatctata caacaacctt
      841 gagaaaacat aagaagaaac gtgatcgatg ctggaaggac atgtcacaat aggctgtgga
      901 cttacctgcc accaattggt gcatttagtc ccttccgtct actttttgat actgtgttat
      961 atgaaaccct attttccttt aaaaaaaaaa
//
