LOCUS       NM_001107427            2222 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus carbohydrate sulfotransferase 4 (Chst4), mRNA.
ACCESSION   NM_001107427 XM_001077198 XM_226454
VERSION     NM_001107427.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   van Zante,A., Gauguet,J.M., Bistrup,A., Tsay,D., von Andrian,U.H.
            and Rosen,S.D.
  TITLE     Lymphocyte-HEV interactions in lymph nodes of a
            sulfotransferase-deficient mouse
  JOURNAL   J Exp Med 198 (9), 1289-1300 (2003)
   PUBMED   14597732
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   de Graffenried,C.L. and Bertozzi,C.R.
  TITLE     Golgi localization of carbohydrate sulfotransferases is a
            determinant of L-selectin ligand biosynthesis
  JOURNAL   J Biol Chem 278 (41), 40282-40295 (2003)
   PUBMED   12855678
REFERENCE   3  (bases 1 to 2222)
  AUTHORS   Bistrup,A., Bhakta,S., Lee,J.K., Belov,Y.Y., Gunn,M.D., Zuo,F.R.,
            Huang,C.C., Kannagi,R., Rosen,S.D. and Hemmerich,S.
  TITLE     Sulfotransferases of two specificities function in the
            reconstitution of high endothelial cell ligands for L-selectin
  JOURNAL   J Cell Biol 145 (4), 899-910 (1999)
   PUBMED   10330415
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            [WARNING] On Oct 26, 2024 this sequence was replaced by
            NM_001107427.3.
            
            On Nov 27, 2020 this sequence version replaced NM_001107427.1.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-94                JAXUCZ010000019.1  54911479-54911572   c
            95-2222             JAXUCZ010000019.1  54902920-54905047   c
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..2222
                     /gene="Chst4"
                     /note="carbohydrate sulfotransferase 4"
                     /db_xref="GeneID:307838"
                     /db_xref="RGD:1310798"
     exon            1..94
                     /gene="Chst4"
                     /inference="alignment:Splign:2.1.0"
     exon            95..2222
                     /gene="Chst4"
                     /inference="alignment:Splign:2.1.0"
     CDS             96..1262
                     /gene="Chst4"
                     /note="carbohydrate (chondroitin 6/keratan)
                     sulfotransferase 4; carbohydrate (N-acetylglucosamine 6-O)
                     sulfotransferase 4"
                     /codon_start=1
                     /product="carbohydrate sulfotransferase 4"
                     /protein_id="NP_001100897.1"
                     /db_xref="GeneID:307838"
                     /db_xref="RGD:1310798"
                     /translation="MMLFKKGRLLAFLCSQVIVVALFVHMSGHRHLFQREESRRPVHV
                     LVLSSWRSGSSFVGQLFGQHPDVFYLMEPAWHVWMTFTSSTAWKLHMAVRDLLRSVFL
                     CDMSVFDAYMNPGPRKQSSLFQWEQSRALCSSPICDFFPADQISSPKHCKPLCSQLPF
                     DMVEKACRSHSHVVLKEVRFLSLQALYPLLTDPSLNLHIVHLVRDPRAVFRSREHTTA
                     ELMIDSHIVLGQNLKMIKEEDQPYYAMKIICKSHVDIVKAIQTLPEVLQRRYLLLRYE
                     DLVRAPLAQTSRLYKFVGLDFLPHLQTWVHNVTRGKGMGQHAFHTNARDALNVSQAWR
                     WSLPYTKVSQLQDDCGEAMDFLGYLQVRSQQEQGNLSLNLLSSSRILGQVFQEG"
ORIGIN      
        1 cttgggcact ggggaagcct aaggtaagaa aagaatccct tggggagccg ctaccatgaa
       61 gggcattatc ccaactacag gatcagaata tcgggatgat gctgtttaag aaagggaggc
      121 tgctggcgtt cctgtgttcc caggtgatag ttgtagctct cttcgtccac atgtccggtc
      181 atagacactt gttccagagg gaggagtcca ggaggcctgt gcacgtgctg gtcctgtctt
      241 cctggcgctc ggggtcctct tttgtgggac agctttttgg gcagcacccg gatgtgttct
      301 acctgatgga gcctgcctgg cacgtgtgga tgactttcac cagcagcaca gcctggaagc
      361 tgcacatggc cgtgcgggat cttctgcgtt ccgtcttcct gtgtgacatg agcgtctttg
      421 atgcctacat gaacccgggc ccccgaaaac aatccagcct cttccagtgg gagcaaagcc
      481 gggccctgtg ctcttcgcct atttgcgact tcttccctgc tgaccagatc agctcgccca
      541 agcattgcaa gccgctctgc agtcagctgc cctttgatat ggtggagaag gcctgccgct
      601 ctcacagcca cgtggtactc aaggaggtgc gtttcctcag cctgcaggcc ctgtatccac
      661 tgctcacaga cccttccctc aacctgcaca tcgtgcacct ggtccgagac ccgcgggctg
      721 tgttccgatc ccgagaacac accacagcag aactcatgat tgacagtcat attgtgctag
      781 ggcagaattt gaaaatgatc aaggaggaag accagcccta ttatgccatg aagatcatct
      841 gcaaaagcca cgtggacata gtcaaggcca tccaaaccct acctgaagtt ctgcagcggc
      901 gttacctgct cctgaggtat gaggacctgg tccgggcacc tctagctcag acttccagac
      961 tgtataaatt tgtggggttg gactttttgc ctcatctcca aacctgggtt cacaatgtca
     1021 cccgtggcaa gggcatgggt cagcatgcct tccacactaa tgccagggac gccctcaacg
     1081 tctcccaggc atggcgttgg tccttacctt atacaaaggt ttctcagctt caagatgact
     1141 gtggtgaagc tatggatttt ctgggatacc tccaggtcag atcccaacaa gagcaaggca
     1201 acctgtccct gaatcttctg tcctcttccc gtatcttggg gcaggtcttc caagaaggtt
     1261 aacgaggtct gtctgcaccc cttggttcca gcctcagtcg ccattaaaca cacggaaacc
     1321 ttaagtaagg tatgaacaaa ctgagcaccc atttatcctc agtcccaagc agaggagtct
     1381 cttttatact caggtctata cggccaagcc taaaaggcca agaaacaata tctttctgtc
     1441 ttgaacattc ttaggagcct tgagcagccc cttcggccct tcaagcaaga ctatcgtctt
     1501 tcttgtttcc tcagccttcc tacctgggca tacctcacag actacggtct gaaggcctat
     1561 tggacacagc aagcagcatc catggagtga gtctgtaaac ctccatgatc acagcttccc
     1621 aataagaagg ggtagaataa gagtcaggga ggggttgggg atttagctca gtggtagagc
     1681 acttgcctag caagtgcaag gccctgagtt tggtcctcag ctccaggagg aaaaaaaaaa
     1741 aaagaaccat ggaaacggga ctttcactga agagttccca gcaacttcca cagagacatg
     1801 aacctcaagg tttccagaga atttgaggaa gcaggggtgg atgcttacct gagagtctgt
     1861 ccattgcagg aatcagaaac aggaagcaga gtccccaaac atcagggcca gagctcaagt
     1921 tcaaggtgtg tcaggtacag atagcatctc gtctcagtgt tttcctgcca tatgggactc
     1981 tgacctgtgt aactgcctcc cagtgatatg aaaattatac cctcagcttc tgttctgaaa
     2041 tccccgtgta tgttgtctaa ggaccagtca ccaatgctca ttctcatggg gttctaacca
     2101 cagacataat caccttggta gagagctgta ttgtcattta ctattaccta acacatagaa
     2161 cgctgcccct tttggagtca gatgataaac tgagcctcag ctctcttcag agctgatgga
     2221 ag
//
