LOCUS       NM_001107537            1529 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus chordin-like 2 (Chrdl2), mRNA.
ACCESSION   NM_001107537 XM_001065852 XM_001065914 XM_218964
VERSION     NM_001107537.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Palmer DJ, Kelly VC, Smit AM, Kuy S, Knight CG and Cooper GJ.
  TITLE     Human colostrum: identification of minor proteins in the aqueous
            phase by proteomics
  JOURNAL   Proteomics 6 (7), 2208-2216 (2006)
   PUBMED   16502470
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Nakayama N, Han CY, Cam L, Lee JI, Pretorius J, Fisher S, Rosenfeld
            R, Scully S, Nishinakamura R, Duryea D, Van G, Bolon B, Yokota T
            and Zhang K.
  TITLE     A novel chordin-like BMP inhibitor, CHL2, expressed preferentially
            in chondrocytes of developing cartilage and osteoarthritic joint
            cartilage
  JOURNAL   Development 131 (1), 229-240 (2004)
   PUBMED   14660436
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473956.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_218964.4, XM_001065852.1, XM_001065914.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN06621351,
                              SAMN06680412 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..1529
                     /gene="Chrdl2"
                     /note="chordin-like 2"
                     /db_xref="GeneID:308854"
                     /db_xref="RGD:1306179"
     exon            1..242
                     /gene="Chrdl2"
                     /inference="alignment:Splign:2.1.0"
     CDS             161..1450
                     /gene="Chrdl2"
                     /note="chordin-like protein 2"
                     /codon_start=1
                     /product="chordin-like protein 2 precursor"
                     /protein_id="NP_001101007.1"
                     /db_xref="GeneID:308854"
                     /db_xref="RGD:1306179"
                     /translation="MVPRVRIIPSLLGLVMFWLPLDSQARARPGKVCLFGEKIYTPGQ
                     SWHPYLEPQGTIYCVRCTCSENGHVNCYRLRCPPLHCSQPVMEPQQCCPRCVDPRVPS
                     GLRVPLKSCQLNETTYQHGEIFSAQELFPARLSNQCVLCSCIEGHTYCGLMTCPEPSC
                     PSTLPLPDSCCQTCKDRTTESSTEENLTQLQHGERHSQDPCSDDGKRRGPSTPAPTSL
                     SSPLGFIPRHFQAIGMGGTTIKIILKEKHKKACTHNGKTYSHGEVWHPTVLSFGPMPC
                     ILCTCMDGYQDCHRVTCPTQYPCSQPKKVAGKCCKTCPEDEADDEHSEVISTRCPKVP
                     GQFHVYTLVSPSPDSLHRFVLEHEASDQVEMYIWRLVKGIYHLIQIKRVRKQDFQKEA
                     QNFRLLTGTHEGYWTVFLAQTPELKVTASPDKVTRTL"
     exon            243..355
                     /gene="Chrdl2"
                     /inference="alignment:Splign:2.1.0"
     exon            356..449
                     /gene="Chrdl2"
                     /inference="alignment:Splign:2.1.0"
     exon            450..592
                     /gene="Chrdl2"
                     /inference="alignment:Splign:2.1.0"
     exon            593..686
                     /gene="Chrdl2"
                     /inference="alignment:Splign:2.1.0"
     exon            687..742
                     /gene="Chrdl2"
                     /inference="alignment:Splign:2.1.0"
     exon            743..908
                     /gene="Chrdl2"
                     /inference="alignment:Splign:2.1.0"
     exon            909..1103
                     /gene="Chrdl2"
                     /inference="alignment:Splign:2.1.0"
     exon            1104..1277
                     /gene="Chrdl2"
                     /inference="alignment:Splign:2.1.0"
     exon            1278..1370
                     /gene="Chrdl2"
                     /inference="alignment:Splign:2.1.0"
     exon            1371..1529
                     /gene="Chrdl2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcatcccca ccttagatct ctcctgcctt tggctcttct tcatctttgc ttatcggact
       61 cctcgggcag ccgtcctact tggtcttggg gacttacttg tgtccttacc tcactttctc
      121 ccggctcacc ccggggtgtc tgaccttggg acaaggaagg atggttccca gggtgaggat
      181 catcccctct ttgctgggac tcgtgatgtt ctggctcccg ttggactcgc aagcccgagc
      241 ccgcccaggc aaggtctgcc ttttcggtga aaagatatat acccctggcc agagctggca
      301 cccgtacttg gaacctcaag gcacgatata ctgtgtgcgc tgtacctgct ctgagaatgg
      361 ccacgtgaat tgttaccgcc tccgatgccc acccctccac tgctcacagc ctgtgatgga
      421 gccgcaacag tgctgtccca ggtgtgtgga tcctcgtgtc ccctccggcc tccgggttcc
      481 tctgaagtcg tgccagctca atgagaccac ataccaacac ggagagatct tcagtgccca
      541 ggagctgttc cccgcccgcc tgtccaacca gtgtgtcctg tgtagctgta ttgagggcca
      601 cacttactgc ggtctcatga cctgccctga acccagctgc cccagcacac tccctctgcc
      661 tgattcctgc tgtcagacat gcaaagacag gacaacggag agttccactg aagaaaactt
      721 gacacagttg cagcacggag agagacattc ccaggatcca tgttcagatg atggaaagag
      781 gagaggcccc agtacgccag cccctaccag cctcagctcc cctctgggct tcatccctcg
      841 ccacttccag gcaataggga tgggcggcac tactatcaag attatcttga aggagaaaca
      901 taagaaagct tgcacacaca atgggaagac atactcccat ggggaggtgt ggcaccctac
      961 tgtgctctcc ttcggcccca tgccctgcat cctgtgcact tgtatggatg gctaccaaga
     1021 ctgccaccgt gtgacctgcc ccacccaata tccctgcagt caacccaaga aagtggctgg
     1081 gaagtgctgc aagacctgcc cagaggatga ggcggatgac gagcacagtg aggtcatttc
     1141 cacccggtgt cccaaggtac caggccagtt ccatgtgtac acattggtat ctccaagccc
     1201 agacagccta caccgctttg tcctggaaca cgaagcctct gaccaggtag agatgtacat
     1261 ctggaggctg gtgaaaggaa tctaccactt gattcagatc aagagagtca ggaagcaaga
     1321 tttccagaaa gaggctcaga acttccggct gctcaccggc acccatgaag gttactggac
     1381 cgtcttccta gcccagactc cagagttgaa agttacagcc agcccagaca aagtgaccag
     1441 gacattatag caaggaccta aacagttgca gatatgagtt ctattggttt tattattata
     1501 tattaataaa gacgtcgcat tacctcctc
//
