LOCUS       NM_001394326            4498 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus choline phosphotransferase 1 (Chpt1), transcript
            variant 1, mRNA.
ACCESSION   NM_001394326 XM_006241231
VERSION     NM_001394326.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4498)
  AUTHORS   Butler,P.L. and Mallampalli,R.K.
  TITLE     Cross-talk between remodeling and de novo pathways maintains
            phospholipid balance through ubiquitination
  JOURNAL   J Biol Chem 285 (9), 6246-6258 (2010)
   PUBMED   20018880
REFERENCE   2  (bases 1 to 4498)
  AUTHORS   Gohda,T., Tanimoto,M., Shiina,K., Ito,T., Kobayashi,M.,
            Hagiwara,S., Kaneko,S., Makita,Y., Funabiki,K., Horikoshi,S. and
            Tomino,Y.
  TITLE     Altered mouse cholinephosphotransferase gene expression in kidneys
            of type 2 diabetic KK/TA mouse
  JOURNAL   Metabolism 53 (7), 842-846 (2004)
   PUBMED   15254874
REFERENCE   3  (bases 1 to 4498)
  AUTHORS   Henneberry,A.L., Wistow,G. and McMaster,C.R.
  TITLE     Cloning, genomic organization, and characterization of a human
            cholinephosphotransferase
  JOURNAL   J Biol Chem 275 (38), 29808-29815 (2000)
   PUBMED   10893425
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Apr 10, 2021 this sequence version replaced XM_006241231.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643296.19249.1,
                                           SRR26643290.25331.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-374               JAXUCZ010000007.1  24802148-24802521   c
            375-522             JAXUCZ010000007.1  24788281-24788428   c
            523-664             JAXUCZ010000007.1  24787248-24787389   c
            665-749             JAXUCZ010000007.1  24785103-24785187   c
            750-881             JAXUCZ010000007.1  24783740-24783871   c
            882-1040            JAXUCZ010000007.1  24780355-24780513   c
            1041-1166           JAXUCZ010000007.1  24779841-24779966   c
            1167-1277           JAXUCZ010000007.1  24778109-24778219   c
            1278-4498           JAXUCZ010000007.1  24772448-24775668   c
FEATURES             Location/Qualifiers
     source          1..4498
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q13"
     gene            1..4498
                     /gene="Chpt1"
                     /note="choline phosphotransferase 1"
                     /db_xref="GeneID:362866"
                     /db_xref="RGD:1359283"
     exon            1..374
                     /gene="Chpt1"
                     /inference="alignment:Splign:2.1.0"
     CDS             102..1322
                     /gene="Chpt1"
                     /EC_number="2.7.8.2"
                     /note="diacylglycerol cholinephosphotransferase 1;
                     cholinephosphotransferase 1 alpha"
                     /codon_start=1
                     /product="cholinephosphotransferase 1"
                     /protein_id="NP_001381255.1"
                     /db_xref="GeneID:362866"
                     /db_xref="RGD:1359283"
                     /translation="MAAGAGARPAPRWVKALGEPLSAAQLRRLEDHRYSAAGESLFEP
                     PLQLFWTWLLQWIPLWIAPNTITLFGLAINLFTTLVLIFYCPTVTEEAPYWTYLLCAL
                     GLFIYQSLDAIDGKQARRTNSCSPLGELFDHGCDSLSTVFMAIGASIAVRLGTHPDWL
                     FFCSFVGMFMFYCAHWQTYVSGVLRFGRVDVTEIQVALVIVFLLSTFGGAMMWDYTIP
                     ILEIKLKILPVLGVVGGLIFSCSNYFHVILHGGVGKNGSTIAGTSVLSPGLHIGLIII
                     LAIMIYKKSATNVFEKHPCLYTLMFGCVFAKVAQKLVIAHMTKSELYLQDTVFIGPGL
                     LFLDQYFNNFIDEYVVLWIAMVITSFDMMIYFSSLCLQISRHLHLSIFKTSYQQAPEQ
                     VQVLSSKTHQNNMD"
     exon            375..522
                     /gene="Chpt1"
                     /inference="alignment:Splign:2.1.0"
     exon            523..664
                     /gene="Chpt1"
                     /inference="alignment:Splign:2.1.0"
     exon            665..749
                     /gene="Chpt1"
                     /inference="alignment:Splign:2.1.0"
     exon            750..881
                     /gene="Chpt1"
                     /inference="alignment:Splign:2.1.0"
     exon            882..1040
                     /gene="Chpt1"
                     /inference="alignment:Splign:2.1.0"
     exon            1041..1166
                     /gene="Chpt1"
                     /inference="alignment:Splign:2.1.0"
     exon            1167..1277
                     /gene="Chpt1"
                     /inference="alignment:Splign:2.1.0"
     exon            1278..4498
                     /gene="Chpt1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagccgagct ggcccgggcg ctgtgccctt gctcggctct ctccgcccac cccgcgcggg
       61 ccgcgggctg cgctgggtcg cggcgggccc cgcaggcggc catggcggcg ggcgccgggg
      121 ccaggccggc gccgcgctgg gtgaaggcgc taggtgagcc gctcagcgcc gcgcagctgc
      181 ggcggctgga ggaccaccgc tacagcgcgg cgggagagtc gctgttcgag ccgccgctgc
      241 agcttttctg gacctggctg ctccaatgga tcccgctctg gatagccccc aacaccatca
      301 ccctcttcgg cctcgccatc aacctgttca ccacactagt gctcatcttc tactgcccta
      361 cggtcacgga ggaggcacca tactggacat accttttatg tgccctggga ctctttatct
      421 accagtcact ggatgccatt gacggaaaac aagccagaag gacaaattcc tgctctcctt
      481 taggggaact gtttgatcat ggttgtgact ctctttccac agtatttatg gctatcggtg
      541 cttcaattgc tgttcgtcta ggaacacatc ctgactggtt gtttttctgc tctttcgttg
      601 ggatgttcat gttttattgt gctcattggc agacttacgt ctcaggagtg ttgcgatttg
      661 gaagggtgga tgtaactgag atccaggtag ctttagtgat tgtctttctg ttatctacat
      721 tcggaggagc aatgatgtgg gactatacga tacctattct agaaataaaa ctgaagatcc
      781 ttccggttct tggagttgta ggtggattaa tattttcctg ttcaaactat ttccatgtga
      841 tcctccatgg tggtgttggc aagaatggat ctactattgc gggcaccagt gtcttgtcac
      901 ctggactcca cataggatta attattatat tggcaataat gatctataaa aaatctgcaa
      961 caaatgtgtt tgaaaaacac ccttgccttt atacattaat gtttggatgt gtctttgcta
     1021 aagttgcaca aaaattggtg atagctcaca tgacaaaaag tgaactatat cttcaagaca
     1081 ctgtttttat tgggccaggt cttttatttt tagaccaata ctttaataat tttatagatg
     1141 aatatgttgt tctatggata gcaatggtca ttacttcatt tgatatgatg atatacttta
     1201 gttctttgtg cctgcaaatt tcaagacacc ttcatctaag tatcttcaag acttcatatc
     1261 aacaagcacc tgaacaggtt caagttcttt cttcaaagac tcatcagaat aacatggatt
     1321 gaagagactt tcgaacattt gccatctctt gctgctgctg tttcatgaaa ggagatatga
     1381 aacatgttta atttttagtt aaatgttata acattttcag caaataaaac ttttaagtgc
     1441 ctccattaat acatatcttt gcaatttaaa atagaactta cagtttccat cataactttt
     1501 ttttgcaaca tagccatttc ttttttaagt tcactttgtg tgccagtaaa tagattatca
     1561 ttgttcttct ccacatcctc caaactctaa aacacaaaag gtcactttag ttataaacta
     1621 acttttaacc agaggtacta aattgtaaaa tcttcaaaag taaaactatt ttcattattc
     1681 agaaagcact cattatttat cccaacattc taagtaactc acatagacta aatttctcag
     1741 tataaacaag taaatatatc acacgttaat caaatacagt taaagtacaa cagtaatatc
     1801 gttgcacaaa acaatagttt aatgaactaa gtaaggtcaa ggtgattaaa aaagaaaatg
     1861 gggaagggaa cgaaacaaga tgggagaaat gcaaatttga ggctagtttg ggcaatgtag
     1921 gatcttgtct taaaagaata agaaaataaa atctaaaaag actacaaggt ctatcagtat
     1981 atacaatttt aaaaatttct aagtttcttc agacatctgg tataatctac ttattgtgat
     2041 taaaagtgtg acttaaattc acaaaagcaa aaaaacatct atagtataaa gtcaagttat
     2101 aaaaattatt agatatttta aatttttatt acagtttcat tctcttagtg aatgtagtgt
     2161 agtgtgtata tgtgtgagtt acacatatat aagcctttat agagagagga caacttgtgg
     2221 atactaggtt ctctccttct ggcatatggg tcccatagat tgaactctga cctagtattt
     2281 tgcttttcaa gacaaagtct catcccaata caggcaaggc tcacctcaaa ctccctaatc
     2341 ccatctcaag cttagaggaa tgtgccataa cacttagcta aaaagtttta aaacatttag
     2401 tactcattca caaaatatat tatatcctat tgcctattat gtagaaaata ctattttgtg
     2461 gagaactaaa ataaaaaaat gagtgttttc tttttttcca atcagaaaaa tatgtaaaca
     2521 acataatttt ataagaatgg aaatgcaact tctgtagcta tctagtggga tatatgaata
     2581 attcctgttt agttaacaaa aagtatacta tttcattaat taaaagggaa cttaaaatat
     2641 tctagaggaa tagttaccaa agtatggaaa tacgtaagtc tgtggattca gagaaagcaa
     2701 ttatgtagat aatttggagt aatgtacatg tatagtttat ataactaaaa atgtacaagg
     2761 gacaacaact acaggtacat tttcaggaag gagatgtttt attaagatta tagggcagag
     2821 tcaaagaata gactgaagaa aagagaaatc agttaaaaga gttttcatag gacaaaatgt
     2881 gatgagaaag tgaaatagta caagcaaaga gtgaacaaat gtactaaatt gcagaaatta
     2941 aagaaatgaa ccactgtaga agtatgaatc ctagaatttg agaacaaaat aaaagataaa
     3001 caggatatag agagcagggc tttaatccca gccctcaaga ggcagaagca gaggcagagg
     3061 caggcagatc tataagttca aggacagcct gatctacaga gtaagttcca ggactgccag
     3121 gactacacag agaaaccttc tcaaaaaata aataacgaaa acccagatat ggaggagtta
     3181 aaattttact gaagtttcta ccaaaatagt aacatttagt gataatatta gaagaaatct
     3241 ttaagttcat cctcaagtcc taccaattaa attgttctta agggacacta gagcaagttg
     3301 ataaggtctc ttggaaatac tttaaaaatt aacttttatg ttcgtattta tctttaaaac
     3361 tacttactat tagggaatgg ttttctagta tgtgtatagg tcaagagata attcttaatt
     3421 tagaaagttt taatcctcaa ctgtgttaaa ttttgggata actcctctca tatataagtt
     3481 ggtatatata gtcattgtgg ttattggaat aattttaaaa gctaatatgc tagacaagac
     3541 ctataataca tttgaaaata agggaataat tccagtagat tcttcctatt gaaaatacac
     3601 taggagtatg tggataaaag gactgcggaa ataaccttaa tatatacata tacatatata
     3661 catacattta catatcatac acacacacat atatttatat agagagagtg tcttactatt
     3721 ttcagtgaaa cagcacaatg gctaaaaagt gttatttaat aaagtatgga cttaatgtat
     3781 aagaactttt taaggtaaaa ctcctacttt gacatttcct gtcttgaata atcttcacag
     3841 gaccacagga cattggaatt ttacagacat atttatcact ttggtcacaa acaatacaaa
     3901 ataaaagaaa ttttaaaaat taaaacatat ttcccataaa tttgcaaaaa atacttaaat
     3961 tatgtgttat aagaatatat gttaggggca agagatggct cagtggttaa gaatacttgt
     4021 tcttataaag gatttaggtt tgatttccag cacctacatg gcaggtccta accatctgta
     4081 atgttaaagg atctactacc ctttgctgac ttctgtgggc agtaggcatg tacatggtat
     4141 acagacatac atataaaaaa cactcatata caatattaaa aaagaatatg ttagctggat
     4201 gttgacacca gcacttggaa agaaaaggta aaagaatctc tgtgagtttg aagccagcct
     4261 actctacaca gcaagttcca ggccagccag gcaatataat gagccttgtt tcaaacaaaa
     4321 acaaaggaga tacacaataa aacaaaaaca tgttactatg tataactcac ctttatgaac
     4381 tgctcatgta gctgtttgat tgctttcatt ctctggctct gaacaattct agtctgctga
     4441 aaaatctttt gctgttgtcg aaaaagattc tataaacatt aaaaaaatgt aataatga
//
